Evidence map›Paper›PMID 16754873›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Nascent DNA processing by RecJ favors lesion repair over translesion synthesis at arrested replication forks in Escherichia coli.

Charmain T Courcelle, Kin-Hoe Chow, Andrew Casey, Justin Courcelle

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Replication stalling activates SSB for recruitment of DNA damage tolerance factors.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Replisome activity slowdown after exposure to ultraviolet light inProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Recombination and replication.Cold Spring Harbor perspectives in biology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Charmain T CourcelleDepartment of Biology, Portland State University, Box 751, Portland, OR 97207-0751, USA. charmc@pdx.edu
Kin-Hoe Chow
Andrew Casey
Justin Courcelle
Portland State University · USUniversity of Utah · US

Funding

DNA Replication Termination in Escherichia coli.F32GM068566 · NIGMS · PORTLAND STATE UNIVERSITY · PI COURCELLE, CHARMAIN T · 2003 to 2005
$158k
NIGMS NIH HHS F32 GM068566
6 · The paper itself

Abstract

DNA lesions that arrest replication can lead to rearrangements, mutations, or lethality when not processed accurately. After UV-induced DNA damage in Escherichia coli, RecA and several recF pathway proteins are thought to process arrested replication forks and ensure that replication resumes accurately. Here, we show that the RecJ nuclease and RecQ helicase, which partially degrade the nascent DNA at blocked replication forks, are required for the rapid recovery of DNA synthesis and prevent the potentially mutagenic bypass of UV lesions. In the absence of RecJ, or to a lesser extent RecQ, the recovery of replication is significantly delayed, and both the recovery and cell survival become dependent on translesion synthesis by polymerase V. The RecJ-mediated processing is proposed to restore the region containing the lesion to a form that allows repair enzymes to remove the blocking lesion and DNA synthesis to resume. In the absence of nascent DNA processing, polymerase V can synthesize past the lesion to prevent lethality, although this occurs with slower kinetics and a higher frequency of mutagenesis.

Indexed as

DNA RepairAdenosine TriphosphatasesDNADNA DamageDNA-Directed DNA PolymeraseDNA HelicasesEscherichia coliEscherichia coli ProteinsExodeoxyribonucleasesMutationRecQ HelicasesUltraviolet RaysAdenosine TriphosphatasesDNADNA-Directed DNA PolymeraseDNA HelicasesDNA polymerase V, E coliEscherichia coli ProteinsExodeoxyribonucleasesRecJ protein, E coliRecQ HelicasesRecQ protein, E coli

Identifiers

PMID16754873
PMCPMC1482582
OpenAlexW2079741709

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.