Evidence map›Paper›PMID 16753217›Full record

ArticleMolecular immunology2007

Mutagenesis, biochemical, and biophysical characterization of Mycoplasma arthritidis-derived mitogen.

Hongmin Li, Yiwei Zhao, Yi Guo, Sandra J Vanvranken, Zhong Li, Leslie Eisele, Walid Mourad

Abstract read
In one paragraph

Article in Molecular immunology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Hongmin LiWadsworth Center, New York State Department of Health, Empire State Plaza, PO Box 509, Albany, NY 12201-0509, USA.
Yiwei Zhao
Yi Guo
Sandra J Vanvranken
Zhong Li
Leslie Eisele
Walid Mourad
New York State Department of Health · USUniversité de Montréal · CAWadsworth Center · US

Funding

Superantigen-immunoreceptor interactionsR01AI050628 · NIAID · WADSWORTH CENTER · PI LI, HONGMIN · 2002 to 2004
$864k
NIAID NIH HHS R01 AI050628NIAID NIH HHS R01 AI50628
6 · The paper itself

Abstract

Mycoplasma arthritidis-derived mitogen (MAM) is a superantigen (SAg) that can activate large fractions of T cells bearing particular TCR Vbeta elements. Here we report the mutagenesis, biochemical and biophysical studies on the dimerization of MAM in solution. Our studies showed that although MAM mainly exists as a monomer in solution, a small percentage of MAM molecules form homodimer at high protein concentration, regardless of the presence of Zn2+. A distinct peak corresponding to a MAM homodimer was detected in the presence of EDTA, using both chemical cross-linking and analytical ultracentrifugation methods. Further mutagenesis studies revealed that single mutation of residues at the interface of the crystallographic dimer of MAM does not significantly affect the dimerization of MAM in solution. Circular dichroism (CD) analysis indicated that addition of Zn2+ does not induce conformational changes of MAM from its apo-state. Thermal denaturation experiments indicated that addition of Zn2+ to MAM solution resulted in a decrease of melting point (Tm), whereas addition of EDTA did not affect the Tm of MAM. These results imply that there is no defined Zn2+-binding site on MAM.

Indexed as

Antigens, BacterialCircular DichroismCross-Linking ReagentsDimerizationEdetic AcidMutagenesisProteinsRecombinant Fusion ProteinsSuccinimidesSuperantigensUltracentrifugationZincAntigens, BacterialCross-Linking Reagentsdisuccinimidyl glutarateEdetic AcidMycoplasma arthritidis mitogenProteinsRecombinant Fusion ProteinsSuccinimidesSuperantigensZinc

Identifiers

PMID16753217
PMCPMC3923304
OpenAlexW2063204237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.