Evidence map›Paper›PMID 16751245›Full record

ArticleBiophysical journal2006

Tertiary structural rearrangements upon oxidation of Methionine145 in calmodulin promotes targeted proteasomal degradation.

Colette A Sacksteder, Jennifer E Whittier, Yijia Xiong, Jinhui Li, Nadezhda A Galeva, Michael E Jacoby, Samuel O Purvine, Todd D Williams, Martin C Rechsteiner, Diana J Bigelow and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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  10. Nitrotyrosine-modified SERCA2: a cellular sensor of reactive nitrogen species.Pflugers Archiv : European journal of physiology · 2009
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Colette A SackstederCell Biology and Biochemistry Group, Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA.
Jennifer E Whittier
Yijia Xiong
Jinhui Li
Nadezhda A Galeva
Michael E Jacoby
Samuel O Purvine
Todd D Williams
Martin C Rechsteiner
Diana J Bigelow
Thomas C Squier
Pacific Northwest National Laboratory · USUniversity of Kansas · USUniversity of Utah · US

Funding

SARCOPENIA AND APOPTOSIS: ROLE OF SERCA AND BCL-2P01AG012993 · NIA · UNIVERSITY OF KANSAS LAWRENCE · PI MICHAELIS, ELIAS K · 1995 to 2012
$14.0M
STRUCTURAL BASIS--ALTERED CALCIUM HOMEOSTASIS OF AGINGR01AG017996 · NIA · UNIVERSITY OF KANSAS LAWRENCE · PI SQUIER, THOMAS COMEY · 2000 to 2003
$1.7M
NIA NIH HHS AG12993NIA NIH HHS AG17996NIA NIH HHS P01 AG012993NIA NIH HHS R01 AG017996
6 · The paper itself

Abstract

The selectivity underlying the recognition of oxidized calmodulin (CaM) by the 20S proteasome in complex with Hsp90 was identified using mass spectrometry. We find that degradation of oxidized CaM (CaMox) occurs in a multistep process, which involves an initial cleavage that releases a large N-terminal fragment (A1-F92) as well as multiple smaller carboxyl-terminus peptides ranging from 17 to 26 amino acids in length. These latter small peptides are enriched in methionine sulfoxides (MetO), suggesting a preferential degradation around MetO within the carboxyl-terminal domain. To confirm the specificity of CaMox degradation and to identify the structural signals underlying the preferential recognition and degradation by the proteasome/Hsp90, we have investigated how the oxidation of individual methionines affect the degradation of CaM using mutants in which all but selected methionines in CaM were substituted with leucines. Substitution of all methionines with leucines except Met144 and Met145 has no detectable effect on the structure of CaM, permitting a determination of how site-specific substitutions and the oxidation of Met144 and Met145 affects the recognition and degradation of CaM by the proteasome/Hsp90. Comparable rates of degradation are observed upon the selective oxidation of Met144 and Met145 in CaM-L7 relative to that observed upon oxidation of all nine methionines in wild-type CaM. Substitution of leucines for either Met144 or Met145 promotes a limited recognition and degradation by the proteasome that correlates with decreases in the helical content of CaM. The specific oxidation of Met144 has little effect on rates of proteolytic degradation by the proteasome/Hsp90 or the structure of CaM. In contrast, the specific oxidation of Met145 results in both large increases in the rate of degradation by the proteasome/Hsp90 and significant circular dichroic spectral shape changes that are indicative of changes in tertiary rather than secondary structure. Thus, tertiary structural changes resulting from the site-specific oxidation of a single methionine (i.e., Met145) promote the degradation of CaM by the proteasome/Hsp90, suggesting a mechanism to regulate cellular metabolism through the targeted modulation of CaM abundance in response to oxidative stress.

Indexed as

Amino Acid SubstitutionAnimalsCalmodulinCattleHSP90 Heat-Shock ProteinsKineticsMethionineOxidation-ReductionProteasome Endopeptidase ComplexProtein DenaturationProtein Structure, TertiaryRadioisotopesStructure-Activity RelationshipCalmodulinHSP90 Heat-Shock ProteinsMethionineProteasome Endopeptidase ComplexRadioisotopes

Identifiers

PMID16751245
PMCPMC1518657
OpenAlexW1995153291

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.