Evidence map›Paper›PMID 16751107›Full record

ArticleCell2006

Global analysis of protein palmitoylation in yeast.

Amy F Roth, Junmei Wan, Aaron O Bailey, Beimeng Sun, Jason A Kuchar, William N Green, Brett S Phinney, John R Yates, Nicholas G Davis

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 293 papers.

0numbers the graph read from it
0cells of the map it votes in
293citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

293 citing papers in PubMed, 539 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. The Vacuolar Protein 8 (Vac8) Homolog inJournal of fungi (Basel, Switzerland) · 2025
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Global analysis of membrane protein S-acylation in the model plantbioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Reduced Palmitoylation of SQSTM1/p62 in Huntington Disease Is Associated With Impaired Autophagy.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Altered Protein Palmitoylation as Disease Mechanism in Neurodegenerative Disorders.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  19. Article
  20. Article

233 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Amy F RothDepartment of Pharmacology, Wayne State University School of Medicine, Detroit, MI 48201, USA.
Junmei Wan
Aaron O Bailey
Beimeng Sun
Jason A Kuchar
William N Green
Brett S Phinney
John R Yates
Nicholas G Davis
Wayne State University · USMichigan State University · USScripps Research Institute · USUniversity of Chicago · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
The Neuronal alpha-bungarotoxin Binding SiteR01NS043782 · NINDS · UNIVERSITY OF CHICAGO · PI GREEN, WILLIAM · 2003 to 2012
$3.0M
Protein Palmitoylation in Yeast and MammalsR01GM065525 · NIGMS · WAYNE STATE UNIVERSITY · PI DAVIS, NICHOLAS G · 2002 to 2010
$2.1M
NCRR NIH HHS P41 RR011823NCRR NIH HHS RR11823NIGMS NIH HHS GM65525NIGMS NIH HHS R01 GM065525NINDS NIH HHS R01 NS043782
6 · The paper itself

Abstract

Protein palmitoylation is a reversible lipid modification that regulates membrane tethering for key proteins in cell signaling, cancer, neuronal transmission, and membrane trafficking. Palmitoylation has proven to be a difficult study: Specifying consensuses for predicting palmitoylation remain unavailable, and first-example palmitoylation enzymes--i.e., protein acyltransferases (PATs)--were identified only recently. Here, we use a new proteomic methodology that purifies and identifies palmitoylated proteins to characterize the palmitoyl proteome of the yeast Saccharomyces cerevisiae. Thirty-five new palmitoyl proteins are identified, including many SNARE proteins and amino acid permeases as well as many other participants in cellular signaling and membrane trafficking. Analysis of mutant yeast strains defective for members of the DHHC protein family, a putative PAT family, allows a matching of substrate palmitoyl proteins to modifying PATs and reveals the DHHC family to be a family of diverse PAT specificities responsible for most of the palmitoylation within the cell.

Indexed as

AcetyltransferasesAcyltransferasesMutationPalmitic AcidProtein Processing, Post-TranslationalProteomeSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionAcetyltransferasesAcyltransferasesPalmitic AcidPfa4 protein, S cerevisiaeprotein acyltransferaseProteomeSaccharomyces cerevisiae Proteins

Identifiers

PMID16751107
PMCPMC2246083
OpenAlexW1981625060

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.