Evidence map›Paper›PMID 16750480›Full record

ArticleBrain research bulletin2006

Near-infrared laser illumination transforms the fluorescence absorbing X-Gal reaction product BCI into a transparent, yet brightly fluorescent substance.

V A Matei, F Feng, S Pauley, K W Beisel, M G Nichols, B Fritzsch

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Brain research bulletin, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.3field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

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  9. Epibranchial placode-derived neurons produce BDNF required for early sensory neuron development.Developmental dynamics : an official publication of the American Association of Anatomists · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

V A MateiCreighton University, Department of Biomedical Sciences, Omaha, NE 68178, USA.
F Feng
S Pauley
K W Beisel
M G Nichols
B Fritzsch
Creighton University · US

Funding

DISSECTING THE EAR NEUROSENSORY DEVELOPMENT.R01DC005590 · NIDCD · UNIVERSITY OF IOWA · PI FRITZSCH, BERND · 2002 to 2010
$3.3M
CONSTRUCTION OF RESEARCH FACILITYC06RR017417 · NCRR · CREIGHTON UNIVERSITY · PI WILSON, M. ROY · 2002 to 2002
$2.0M
NCRR NIH HHS 1 C06 RR17417-01NCRR NIH HHS C06 RR017417NIDCD NIH HHS DC005590NIDCD NIH HHS R01 DC005590
6 · The paper itself

Abstract

The beta-galactosidase protein generated by the bacterial LacZ gene is widely used to map gene expression patterns. The ease of its use is only rivaled by green fluorescent protein, which can be used in combination with various other procedures such as immunocytochemistry, flow cytometry, or tract tracing. The beta-galactosidase enzymatic reaction potentially provides a more sensitive assay of gene expression than green fluorescent protein. However, the virtual impermeability and tendency to absorb light over a wide range limit the use of the most frequently used beta-galactosidase substrate, X-Gal, in combination with other fluorescent labeling procedures. Here, we provide details on a simple photoactivation procedure that transforms the light-absorbing X-Gal product, 5-bromo-4-chloro-3-indolyl (BCI) precipitate, into an intensely fluorescent product excited by 488 and 633 nm light. Photoactivation is achieved through exposure to 730 nm near-infrared light emitted from a femtosecond titanium-doped Sapphire laser. Photoactivation of BCI occurs in tissue sections suspended in buffered saline, glycerol, or even embedded in epoxy resin. A protocol for the use of BCI photoactivation is here provided. Importantly, the BCI photoactivated product is photoswitchable, displaying bistable photochromism. This permits the use of the fluorescent product in a variety of co-localization studies in conjunction with other imaging modalities. As with other bistable and photoswitchable products, the BCI reaction product shows concentration quenching at high density and can be degraded by continuous exposure to intense 730 nm illumination. Therefore, care must be taken in developing imaging strategies. Our findings have implications for the use of X-Gal in gene and protein detection and provide a novel substrate for high density digital information storage.

Indexed as

FluorescenceLasersLightingAnimalsbeta-GalactosidaseBrainDiagnostic ImagingEarGalactosidesIndolesLac OperonMiceMice, TransgenicMicroscopy, ConfocalPhotic StimulationPhotochemistry5-bromo-4-chloro-3-indolyl beta-galactosidebeta-GalactosidaseGalactosidesIndoles

Identifiers

PMID16750480
PMCPMC3904734
OpenAlexW2051922516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.