Evidence map›Paper›PMID 16740662›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

AtALMT1, which encodes a malate transporter, is identified as one of several genes critical for aluminum tolerance in Arabidopsis.

Owen A Hoekenga, Lyza G Maron, Miguel A Piñeros, Geraldo M A Cançado, Jon Shaff, Yuriko Kobayashi, Peter R Ryan, Bei Dong, Emmanuel Delhaize, Takayuki Sasaki and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 217 papers.

0numbers the graph read from it
0cells of the map it votes in
217citing papers in PubMed
29.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

217 citing papers in PubMed, 577 citations in OpenAlex.

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  12. CPK28-mediated CaNature communications · 2025
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  18. Frontiers in plant science · 2025
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157 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 4 countries.

Owen A HoekengaBoyce Thompson Institute for Plant Research, Ithaca, NY 14853, USA.
Lyza G Maron
Miguel A Piñeros
Geraldo M A Cançado
Jon Shaff
Yuriko Kobayashi
Peter R Ryan
Bei Dong
Emmanuel Delhaize
Takayuki Sasaki
Hideaki Matsumoto
Yoko Yamamoto
Hiroyuki Koyama
Leon V Kochian
Cornell University · USAgricultural Research Service · USPlant Industry · AUIthaca College · USOkayama Prefectural Kurashiki Chuo High School · JPOkayama University · JPRockefeller Foundation · USUnited States Department of Agriculture · USUniversidade Estadual de Campinas (UNICAMP) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aluminum (Al) tolerance in Arabidopsis is a genetically complex trait, yet it is mediated by a single physiological mechanism based on Al-activated root malate efflux. We investigated a possible molecular determinant for Al tolerance involving a homolog of the wheat Al-activated malate transporter, ALMT1. This gene, named AtALMT1 (At1g08430), was the best candidate from the 14-member AtALMT family to be involved with Al tolerance based on expression patterns and genomic location. Physiological analysis of a transferred DNA knockout mutant for AtALMT1 as well as electrophysiological examination of the protein expressed in Xenopus oocytes showed that AtALMT1 is critical for Arabidopsis Al tolerance and encodes the Al-activated root malate efflux transporter associated with tolerance. However, gene expression and sequence analysis of AtALMT1 alleles from tolerant Columbia (Col), sensitive Landsberg erecta (Ler), and other ecotypes that varied in Al tolerance suggested that variation observed at AtALMT1 is not correlated with the differences observed in Al tolerance among these ecotypes. Genetic complementation experiments indicated that the Ler allele of AtALMT1 is equally effective as the Col allele in conferring Al tolerance and Al-activated malate release. Finally, fine-scale mapping of a quantitative trait locus (QTL) for Al tolerance on chromosome 1 indicated that AtALMT1 is located proximal to this QTL. These results indicate that AtALMT1 is an essential factor for Al tolerance in Arabidopsis but does not represent the major Al tolerance QTL also found on chromosome 1.

Indexed as

AluminumAmino AcidsArabidopsisArabidopsis ProteinsDNA, PlantElectrophysiologyGenes, PlantMolecular Sequence DataMutationOrganic Anion TransportersPlant RootsPolymorphism, GeneticALMT1 protein, ArabidopsisAluminumAmino AcidsArabidopsis ProteinsDNA, PlantOrganic Anion Transporters

Identifiers

PMID16740662
PMCPMC1480476
OpenAlexW2159995170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.