Evidence map›Paper›PMID 16732481›Full record

ArticleVirus genes2006

The complete nucleotide sequence and genomic organization of Citrus Leprosis associated Virus, Cytoplasmatic type (CiLV-C).

Renata C Pascon, João Paulo Kitajima, Michèle C Breton, Laura Assumpção, Christian Greggio, Almir S Zanca, Vagner Katsumi Okura, Marcos C Alegria, Maria E Camargo, Giovana G C Silva and 15 more

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Pest categorisation of Citrus leprosis viruses.EFSA journal. European Food Safety Authority · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Frontiers in plant science · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 1 institution in 1 country.

Renata C PasconAlellyx Applied Genomics, Techno Park (Rod. Anhanguera Km 104), Rua James Clerk Maxwell 320, 13069-380, Campinas, SP, Brazil.
João Paulo Kitajima
Michèle C Breton
Laura Assumpção
Christian Greggio
Almir S Zanca
Vagner Katsumi Okura
Marcos C Alegria
Maria E Camargo
Giovana G C Silva
Jussara C Cardozo
Marcelo A Vallim
Sulamita F Franco
Vitor H Silva
Hamilton Jordão
Fernanda Oliveira
Poliana F Giachetto
Fernanda Ferrari
Carlos I Aguilar-Vildoso
Fabrício J B Franchiscini
José M F Silva
Paulo Arruda
Jesus A Ferro
Fernando Reinach
Ana Cláudia Rasera da Silva
Anhanguera (Brazil) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Citrus leprosis disease (CiL) is associated to a virus (CiLV) transmitted by Brevipalpus spp. mites (Acari: Tenuipalpidae). CiL is endemic in Brazil and its recently spreading to Central America represents a threat to citrus industry in the USA. Electron microscopy images show two forms of CiLV: a rare nuclear form, characterized by rod-shaped naked particle (CiLV-N) and a common cytoplasmic form (CiLV-C) associated with bacilliform-enveloped particle and cytoplasmic viroplasm. Due to this morphological feature, CiLV-C has been treated as Rhabdovirus-like. In this paper we present the complete nucleotide sequence and genomic organization of CiLV-C. It is a bipartite virus with sequence similarity to ssRNA positive plant virus. RNA1 encodes a putative replicase polyprotein and an ORF with no known function. RNA2 encodes 4 ORFs. pl5, p24 and p61 have no significant similarity to any known proteins and p32 encodes a protein with similarity to a viral movement protein. The CiLV-C sequences are associated with typical symptoms of CiL by RT-PCR. Phylogenetic analysis suggests that CiLV-C is probably a member of a new family of plant virus evolutionarily related to Tobamovirus.

Indexed as

Base SequenceGenome, ViralCitrus sinensisMolecular Sequence DataPhylogenyPlant DiseasesPlant LeavesPlant VirusesReverse Transcriptase Polymerase Chain ReactionRNA, ViralRNA VirusesSequence Analysis, DNARNA, Viral

Identifiers

PMID16732481
OpenAlexW1992403504

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.