Evidence map›Paper›PMID 16731556›Full record

ArticleBiophysical journal2006

Diffusion rate limitations in actin-based propulsion of hard and deformable particles.

Richard B Dickinson, Daniel L Purich

Abstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. The Actin Cytoskeleton and Actin-Based Motility.Cold Spring Harbor perspectives in biology · 2018
    Review
  2. Actin Turnover in Lamellipodial Fragments.Current biology : CB · 2017
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Effects of molecular-scale processes on observable growth properties of actin networks.Physical review. E, Statistical, nonlinear, and soft matter physics · 2010
    Article
  10. Article
  11. Article
  12. Article
  13. Models for actin polymerization motors.Journal of mathematical biology · 2009
    Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Richard B DickinsonDepartment of Chemical Engineering, University of Florida Colleges of Engineering and Medicine, Gainesville, Florida 32611-6005, USA. dickso@che.ufl.edu
Daniel L Purich

Funding

ACTIVE-BASED MOTILITY BY CLAMPED-FILAMENT MOTORSR01GM067828 · NIGMS · UNIVERSITY OF FLORIDA · PI PURICH, DANIEL LEE · 2004 to 2006
$669k
NIGMS NIH HHS R01 GM067828NIGMS NIH HHS R01-GM067828
6 · The paper itself

Abstract

The mechanism by which actin polymerization propels intracellular vesicles and invasive microorganisms remains an open question. Several recent quantitative studies have examined propulsion of biomimetic particles such as polystyrene microspheres, phospholipid vesicles, and oil droplets. In addition to allowing quantitative measurement of parameters such as the dependence of particle speed on its size, these systems have also revealed characteristic behaviors such a saltatory motion of hard particles and oscillatory deformation of soft particles. Such measurements and observations provide tests for proposed mechanisms of actin-based motility. In the actoclampin filament end-tracking motor model, particle-surface-bound filament end-tracking proteins are involved in load-insensitive processive insertion of actin subunits onto elongating filament plus-ends that are persistently tethered to the surface. In contrast, the tethered-ratchet model assumes working filaments are untethered and the free-ended filaments grow as thermal ratchets in a load-sensitive manner. This article presents a model for the diffusion and consumption of actin monomers during actin-based particle propulsion to predict the monomer concentration field around motile particles. The results suggest that the various behaviors of biomimetic particles, including dynamic saltatory motion of hard particles and oscillatory vesicle deformations, can be quantitatively and self-consistently explained by load-insensitive, diffusion-limited elongation of (+)-end-tethered actin filaments, consistent with predictions of the actoclampin filament-end tracking mechanism.

Indexed as

Models, ChemicalModels, MolecularActinsComputer SimulationDiffusionElasticityHardnessMolecular Motor ProteinsMotionNanostructuresParticle SizeProtein ConformationStress, MechanicalActinsMolecular Motor Proteins

Identifiers

PMID16731556
PMCPMC1518650

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.