Evidence map›Paper›PMID 16728447›Full record

ArticleThe Journal of physiology2006

Studying properties of neurotransmitter receptors by non-stationary noise analysis of spontaneous synaptic currents.

Espen Hartveit, Margaret Lin Veruki

Abstract read
In one paragraph

Article in The Journal of physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Two-photon imaging of nonlinear glutamate release dynamics at bipolar cell synapses in the mouse retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2013
    Article
  6. Article
  7. Article
  8. Profound desensitization by ambient GABA limits activation of δ-containing GABAA receptors during spillover.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
  9. Ideal observer analysis of signal quality in retinal circuits.Progress in retinal and eye research · 2009
    Article
  10. Article
  11. Homosynaptic long-term synaptic potentiation of the "winner" climbing fiber synapse in developing Purkinje cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Espen HartveitUniversity of Bergen, Department of Biomedicine, Jonas Lies vei 91, N-5009 Bergen, Norway. espen.hartveit@biomed.uib.no
Margaret Lin Veruki

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The properties of neurotransmitter receptor channels are important for determining synaptic transmission in the nervous system. The presence of quantal variability complicates the use of conventional non-stationary noise analysis for determining the unitary conductance and number of channels involved in synaptic currents. Peak-scaled non-stationary noise analysis has been used to compensate for quantal variability, but there is evidence that the resulting variance versus mean relationships can be transformed from parabolic to skewed. We have used computer modelling based on experimentally derived kinetic schemes to investigate such relationships and demonstrate that their shape is a consequence of the temporal structure of the fluctuations during synaptic responses. Covariance analysis showed that peak-scaling generates a skewed relationship when the covariance function decays rapidly (compared to the average response waveform), corresponding to a low correlation between fluctuations at the peak and in neighbouring regions of the decay phase. A parabolic relationship is obtained when the covariance function decays more slowly, corresponding to a higher correlation. Irrespective of a skewed or parabolic relationship, we demonstrate that the unitary current can be reliably estimated, with a coefficient of variation (CV) as low as 0.05 and bias as low as +/-2% under ideal conditions. While the shape of the variance versus mean curve after peak-scaled non-stationary noise analysis is ultimately a consequence of the kinetic properties of the channels, inadequate alignment of individual waveforms can transform the relationship from parabolic to skewed, and low-pass filtering can transform the relationship from skewed to parabolic. These findings have important implications for analysis of experimental data.

Indexed as

Models, NeurologicalAction PotentialsAnimalsBiological ClocksComputer SimulationHumansIon Channel GatingMembrane PotentialsModels, StatisticalNeurotransmitter AgentsSensory Receptor CellsStochastic ProcessesSynaptic TransmissionNeurotransmitter Agents

Identifiers

PMID16728447
PMCPMC1817749

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.