Evidence map›Paper›PMID 16710297›Full record

ArticleThe EMBO journal2006

Crystal structure of CHP2 complexed with NHE1-cytosolic region and an implication for pH regulation.

Youssef Ben Ammar, Soichi Takeda, Takashi Hisamitsu, Hidezo Mori, Shigeo Wakabayashi

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 67 citations in OpenAlex.

  1. Review
  2. Review
  3. Inverse regulation of SOS1 and HKT1 protein localization and stability by SOS3/CBL4 inProceedings of the National Academy of Sciences of the United States of America · 2024
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  4. Review
  5. Article
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  7. Article
  8. How Does Our Knowledge on the NaFrontiers in physiology · 2022
    Review
  9. Article
  10. Involvement of CHP2 in the Development of Non-Small Cell Lung Cancer and Patients' Poor Prognosis.Applied immunohistochemistry & molecular morphology : AIMM · 2020
    Article
  11. Article
  12. Article
  13. Review
  14. Phosphorylation of NHE3-SMolecular biology of the cell · 2017
    Article
  15. Review
  16. Article
  17. The biophysical and molecular basis of intracellular pH sensing by Na+/H+ exchanger-3.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2013
    Article
  18. Article
  19. Article
  20. Calcineurin homologous protein: a multifunctional Ca2+-binding protein family.American journal of physiology. Renal physiology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Youssef Ben AmmarDepartment of Molecular Physiology, National Cardiovascular Center Research Institute, Suita, Osaka, Japan.
Soichi Takeda
Takashi Hisamitsu
Hidezo Mori
Shigeo Wakabayashi
National Cerebral and Cardiovascular Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plasma membrane Na+/H+ exchangers (NHE) require calcineurin B homologous protein (CHP) as an obligatory binding partner for ion transport. Here, we report the first crystal structure of CHP (CHP2 isoform) in complex with its binding domain in NHE1. We show that the cytoplasmic alpha-helix of NHE1 is inserted into the hydrophobic cleft formed by N- and C-lobes of CHP2 and that the size and shape of this crevice together with hydrogen bond formation at multiple positions assure a high degree of specificity for interaction with NHE members. Structure-based mutagenesis revealed the importance of hydrophobic interactions between CHP/NHE1 for the function of NHE1. Furthermore, the crystal structure shows the existence of a protruding CHP-unique region, and deletion of this region in CHP2 inhibited the NHE1 activity by inducing the acidic shift of intracellular pH dependence, while preserving interaction with NHE1. These findings suggest that CHP serves as an obligatory subunit that is required both for supporting the basic activity and regulating the pH-sensing of NHE1 via interactions between distinct parts of these proteins.

Indexed as

Protein Structure, SecondaryProtein Structure, TertiaryAmino Acid SequenceBinding SitesCalcium-Binding ProteinsCation Transport ProteinsCell LineCrystallography, X-RayHumansHydrogen BondingHydrogen-Ion ConcentrationMembrane ProteinsModels, MolecularMolecular Sequence DataRecombinant Fusion ProteinsSequence AlignmentCalcium-Binding ProteinsCation Transport ProteinsCHP1 protein, humanMembrane ProteinsRecombinant Fusion ProteinsSLC9A1 protein, humanSodiumSodium-Hydrogen Exchanger 1Sodium-Hydrogen Exchangers

Identifiers

PMID16710297
PMCPMC1478177
OpenAlexW2121330468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.