Evidence map›Paper›PMID 16709630›Full record

ArticleThe Journal of physiology2006

Single-channel analysis of a point mutation of a conserved serine residue in the S2 ligand-binding domain of the NR2A NMDA receptor subunit.

David J A Wyllie, Alexander R Johnston, Diane Lipscombe, Philip E Chen

Open access · greenAbstract read
In one paragraph

Article in The Journal of physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

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  11. Taking the time to study competitive antagonism.British journal of pharmacology · 2007
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

David J A WyllieCentre for Neuroscience Research, University of Edinburgh, 1 George Square, Edinburgh EH8 9JZ, UK. dwyllie1@staffmail.ed.ac.uk
Alexander R Johnston
Diane Lipscombe
Philip E Chen
University of Edinburgh · GBBrown University · US

Funding

NEURONAL CALCIUM CHANNELS--REGULATION AND FUNCTIONR01NS029967 · NINDS · BROWN UNIVERSITY · PI LIPSCOMBE, DIANE · 1997 to 2009
$3.0M
NEURONAL CALIUM CHANNELS--REGULATION AND FUNCTIONR29NS029967 · NINDS · BROWN UNIVERSITY · PI LIPSCOMBE, DIANE · 1992 to 1996
–
Biotechnology and Biological Sciences Research Council BB/D001978/1Biotechnology and Biological Sciences Research Council C16800NINDS NIH HHS NS29967NINDS NIH HHS R01 NS029967
6 · The paper itself

Abstract

We have examined the function of a conserved serine residue (Ser670) in the S2 ligand-binding region of the NR2A N-methyl-d-aspartate (NMDA) receptor subunit, using recombinant NR1/NR2A receptors expressed in Xenopus laevis oocytes. Mutation of Ser670 to glycine (S670G) in NR2A reduced the potency of glutamate by 124-fold. Single-channel conductance and the duration of apparent open periods of NR2A(S670G) receptor mutants were, however, indistinguishable from wild-type NMDA receptors. NR1/NR2A(S670G) shut-time distributions were best described by a mixture of six exponential components, and the four shortest shut intervals of each distribution were considered to occur within a channel activation (burst). Bursts of single-channel openings were fitted with a mixture of four exponential components. The longest two components carried the majority of the charge transfer and had mean durations of 9.6 +/- 0.5 and 29.6 +/- 1.5 ms. The overall channel open probability during a burst was high (mean, 0.83 +/- 0.06). Consistent with a shortening of NMDA receptor-channel burst lengths was the observation of an increased deactivation rate of macroscopic currents evoked by brief applications of glutamate to outside-out membrane patches. Correlations between shut times and adjacent open times were observed in all data records. Noticeably, shorter than average openings tended to occur next to long closed periods, whereas longer than average openings tended to occur next to short closings. Our single-channel data, together with modelling using a kinetic scheme to describe channel activations, support our hypothesis that the S670G point mutation reduces the dwell time of glutamate in its binding site.

Indexed as

Point MutationAnimalsCells, CulturedFemaleGene Expression RegulationGlutamic AcidIon Channel GatingMembrane PotentialsOocytesPatch-Clamp TechniquesProtein BindingProtein Structure, TertiaryReceptors, N-Methyl-D-AspartateSerineXenopus laevisGlutamic AcidNR2A NMDA receptorReceptors, N-Methyl-D-AspartateSerine

Identifiers

PMID16709630
PMCPMC1817770
OpenAlexW1614712428

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.