ArticleJournal of bacteriology2006
Complete cellulase system in the marine bacterium Saccharophagus degradans strain 2-40T.
Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
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Who cites it
42 citing papers in PubMed.
- Article
- An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose.iScience · 2022Article
- Genomic insight for algicidal activity in Rhizobium strain AQ_MP.Archives of microbiology · 2021Article
- Some characters of bacterial cellulases in goats' rumen elucidated by metagenomic DNA analysis and the role of fibronectin 3 module for endoglucanase function.Animal bioscience · 2021Article
- Mechanistic strategies of microbial communities regulating lignocellulose deconstruction in a UK salt marsh.Microbiome · 2021Article
- Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption.PloS one · 2018Article
- Biochemical properties of GH94 cellodextrin phosphorylase THA_1941 from a thermophilic eubacterium Thermosipho africanus TCF52B with cellobiose phosphorylase activity.Scientific reports · 2017Article
- Recent Advances and Challenges towards Sustainable Polyhydroxyalkanoate (PHA) Production.Bioengineering (Basel, Switzerland) · 2017Review
- Biochemical Characterization and Low-Resolution SAXS Molecular Envelope of GH1 β-Glycosidase from Saccharophagus degradans.Molecular biotechnology · 2016Article
- A Novel Glycoside Hydrolase Family 5 β-1,3-1,6-Endoglucanase from Saccharophagus degradans 2-40T and Its Transglycosylase Activity.Applied and environmental microbiology · 2016Article
- Biochemical and Structural Characterization of a Five-domain GH115 α-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T.The Journal of biological chemistry · 2016Article
- Isolation and Complete Genome Sequence of Algibacter alginolytica sp. nov., a Novel Seaweed-Degrading Bacteroidetes Bacterium with Diverse Putative Polysaccharide Utilization Loci.Applied and environmental microbiology · 2016Article
- Crystal Structure and Substrate Recognition of Cellobionic Acid Phosphorylase, Which Plays a Key Role in Oxidative Cellulose Degradation by Microbes.The Journal of biological chemistry · 2015Article
- Lignocellulose depolymerization occurs via an environmentally adapted metabolic cascades in the wood-rotting basidiomycete Phanerochaete chrysosporium.MicrobiologyOpen · 2015Article
- A laboratory case study of efficient polyhydoxyalkonates production by Bacillus cereus, a contaminant in Saccharophagus degradans ATCC 43961 in minimal sea salt media.Current microbiology · 2014Article
- Statistical media optimization and cellulase production from marine Bacillus VITRKHB.3 Biotech · 2014Article
- Extracellular endoglucanase activity from Paenibacillus polymyxa BEb-40: production, optimization and enzymatic characterization.World journal of microbiology & biotechnology · 2014Article
- Label-free protein quantification for plant Golgi protein localization and abundance.Plant physiology · 2014Article
- Multiple regulatory mechanisms control the expression of the Geobacillus stearothermophilus gene for extracellular xylanase.The Journal of biological chemistry · 2014Article
- Multisubstrate isotope labeling and metagenomic analysis of active soil bacterial communities.mBio · 2014Article
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Authors and funding
6 authors.
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Abstract
Saccharophagus degradans strain 2-40 is a representative of an emerging group of marine complex polysaccharide (CP)-degrading bacteria. It is unique in its metabolic versatility, being able to degrade at least 10 distinct CPs from diverse algal, plant and invertebrate sources. The S. degradans genome has been sequenced to completion, and more than 180 open reading frames have been identified that encode carbohydrases. Over half of these are likely to act on plant cell wall polymers. In fact, there appears to be a full array of enzymes that degrade and metabolize plant cell walls. Genomic and proteomic analyses reveal 13 cellulose depolymerases complemented by seven accessory enzymes, including two cellodextrinases, three cellobiases, a cellodextrin phosphorylase, and a cellobiose phosphorylase. Most of these enzymes exhibit modular architecture, and some contain novel combinations of catalytic and/or substrate binding modules. This is exemplified by endoglucanase Cel5A, which has three internal family 6 carbohydrate binding modules (CBM6) and two catalytic modules from family five of glycosyl hydrolases (GH5) and by Cel6A, a nonreducing-end cellobiohydrolase from family GH6 with tandem CBM2s. This is the first report of a complete and functional cellulase system in a marine bacterium with a sequenced genome.
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