Evidence map›Paper›PMID 16704206›Full record

ArticleBioconjugate chemistry

Synthesis of a biotin derivative of iberiotoxin: binding interactions with streptavidin and the BK Ca2+-activated K+ channel expressed in a human cell line.

Jon-Paul Bingham, Shumin Bian, Zhi-Yong Tan, Zoltan Takacs, Edward Moczydlowski

Open access · greenAbstract read
In one paragraph

Article in Bioconjugate chemistry. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Mitochondrial ion channels in cardiac function.American journal of physiology. Cell physiology · 2021
    Review
  7. Inhibition of BKPhysiological reports · 2018
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Jon-Paul BinghamDepartment of Biology, Clarkson University, Potsdam, New York 13699, USA.
Shumin Bian
Zhi-Yong Tan
Zoltan Takacs
Edward Moczydlowski
University of Iowa · USYale University · USClarkson University · US

Funding

STRUCTURE/FUNCTION OF SLO CHANNELSP01NS042202 · NINDS · YALE UNIVERSITY · PI KACZMAREK, LEONARD K · 2001 to 2005
$7.4M
NINDS NIH HHS P01 NS042202NINDS NIH HHS P01 NS42202
6 · The paper itself

Abstract

Iberiotoxin (IbTx) is a scorpion venom peptide that inhibits BK Ca2+-activated K+ channels with high affinity and specificity. Automated solid-phase synthesis was used to prepare a biotin-labeled derivative (IbTx-LC-biotin) of IbTx by substitution of Asp19 of the native 37-residue peptide with N--(D-biotin-6-amidocaproate)-L-lysine. Both IbTx-LC-biotin and its complex with streptavidin (StrAv) block single BK channels from rat skeletal muscle with nanomolar affinity, indicating that the biotin-labeled residue, either alone or in complex with StrAv, does not obstruct the toxin binding interaction with the BK channel. IbTx-LC-biotin exhibits high affinity (KD = 26 nM) and a slow dissociation rate (koff = 5.4 x 10(-4) s(-1)) in a macroscopic blocking assay of whole-cell current of the cloned human BK channel. Titration of IbTx-LC-biotin with StrAv monitored by high performance size exclusion chromatography is consistent with a stoichiometry of two binding sites for IbTx-LC-biotin per StrAv tetramer, indicating that steric interference hinders simultaneous binding of two toxin molecules on each of the two biotin-binding faces of StrAv. In combination with fluorescent conjugates of StrAv or anti-biotin antibody, IbTx-LC-biotin was used to image the surface distribution of BK channels on a transfected cell line. Fluorescence microscopy revealed a patch-like surface distribution of BK channel protein. The results support the feasibility of using IbTx-LC-biotin and similar biotin-tagged K+ channel toxins for diverse applications in cellular neurobiology. .

Indexed as

Amino Acid SequenceBiotinCell LineElectrophysiologyHumansLarge-Conductance Calcium-Activated Potassium ChannelsMass SpectrometryModels, MolecularMolecular Sequence DataPatch-Clamp TechniquesPeptidesPotassium Channel BlockersProtein Structure, QuaternaryProtein Structure, TertiaryStreptavidinBiotiniberiotoxinLarge-Conductance Calcium-Activated Potassium ChannelsPeptidesPotassium Channel BlockersStreptavidin

Identifiers

PMID16704206
PMCPMC2505059
OpenAlexW2054899902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.