Evidence map›Paper›PMID 16703517›Full record

ArticleThe Journal of infectious diseases2006

Detection of ganciclovir resistance in patients with AIDS and cytomegalovirus retinitis: correlation of genotypic methods with viral phenotype and clinical outcome.

Douglas A Jabs, Barbara K Martin, Michelle O Ricks, Michael S Forman, Cytomegalovirus Retinitis and Viral Resistance Study Group

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Classification Criteria for Cytomegalovirus Retinitis.American journal of ophthalmology · 2021
    Article
  3. Article
  4. Cytomegalovirus retinitis in the post-cART era.Current ophthalmology reports · 2018
    Article
  5. Cytomegalovirus infection in transplant recipients.Clinics (Sao Paulo, Brazil) · 2015
    Review
  6. Role of molecular diagnostics in ocular microbiology.Current ophthalmology reports · 2013
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Douglas A JabsDepartment of Ophthalmology, School of Medicine, The Johns Hopkins University, Baltimore, Maryland, USA. djabs@jhmi.edu
Barbara K Martin
Michelle O Ricks
Michael S Forman
Cytomegalovirus Retinitis and Viral Resistance Study Group
Johns Hopkins Medicine · USJohns Hopkins University · USOphthalmology Associates (United States) · US

Funding

ZINC AND CA EDTA THERAPY OF PLUMBISMM01RR000052 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BELCHER, HAROLYN MILLICENT EDITH · 1985 to 2007
$37.3M
CMV RETINITIS AND VIRAL RESISTANCER01EY010268 · NEI · JOHNS HOPKINS UNIVERSITY · PI JABS, DOUGLAS A · 1993 to 2003
$2.2M
Analysis of Viral Resistance in CMV RetinitisR03EY015643 · NEI · JOHNS HOPKINS UNIVERSITY · PI JABS, DOUGLAS A · 2004 to 2005
$327k
NCRR NIH HHS M01 RR000052NCRR NIH HHS M01-RR00052NEI NIH HHS EY015643NEI NIH HHS EY10268NEI NIH HHS R03 EY015643
6 · The paper itself

Abstract

backgroundThe cytomegalovirus (CMV) UL97 gene can be sequenced either from blood specimens directly amplified by polymerase chain reaction (PCR) or from culture isolates, to detect resistance to ganciclovir.

methodsA prospective epidemiological study was conducted in which paired specimens were routinely obtained for sequencing of the UL97 gene from blood specimens (i.e., plasma and leukocytes) directly amplified by PCR and from CMV culture isolates. The specimens then were compared with each other and in terms of results of susceptibility testing and their association with progression of retinitis.

resultsA total of 845 paired specimens were obtained from 165 patients with AIDS and CMV retinitis. There typically was >90% agreement between the UL97 gene sequences from blood specimens directly amplified by PCR and those from culture isolates. The agreement between phenotypic resistance and the detection of UL97 mutations was >92% for PCR-amplified blood specimens and >97% for culture isolates. Plasma and leukocytes performed similarly. Progression of retinitis was correlated with the detection of UL97 mutations in PCR-amplified blood specimens, with adjusted odds ratios of 7.02 (P=.002) for leukocytes, 9.11 (P=.02) for plasma, and 17.6 for culture isolates (P<.0001).

conclusionsBecause blood specimens directly amplified by PCR can be analyzed more rapidly than can cultures (< or =48 h vs. > or =4 weeks), sequencing the CMV UL97 gene from blood specimens directly amplified by PCR may be useful clinically.

Indexed as

Acquired Immunodeficiency SyndromeAdultAIDS-Related Opportunistic InfectionsAntiretroviral Therapy, Highly ActiveCytomegalovirusCytomegalovirus RetinitisDisease ProgressionDNA, ViralDrug Resistance, ViralFemaleGanciclovirHumansLeukocytesMaleMicrobial Sensitivity TestsMutationDNA, ViralGanciclovirganciclovir kinasePhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID16703517
PMCPMC8900983
OpenAlexW2046952963

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.