Evidence map›Paper›PMID 16702976›Full record

ArticleMolecular psychiatry2006

Specificity and timing of neocortical transcriptome changes in response to BDNF gene ablation during embryogenesis or adulthood.

C Glorioso, M Sabatini, T Unger, T Hashimoto, L M Monteggia, D A Lewis, K Mirnics

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular psychiatry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed, 2 pooled it
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 2 syntheses or guidelines pooled it, 102 citations in OpenAlex.

  1. Pooled it
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  10. Stress and Its Impact on the Transcriptome.Biological psychiatry · 2021
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3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

C GloriosoDepartment of Psychiatry, University of Pittsburgh School of Medicine, PA 15261, USA.
M Sabatini
T Unger
T Hashimoto
L M Monteggia
D A Lewis
K Mirnics
University of Pittsburgh · USThe University of Texas Southwestern Medical Center · US

Funding

THE ROLE OF PREFRONTAL CORTEX IN THE COGNITIVE DYSFUNCTIONS OF SCHIZOPHRENIAP50MH045156 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BARRIONUEVO, GERMAN · 1990 to 2007
$17.9M
Neocortical Transcriptome Changes in SchizophreniaR01MH067234 · NIMH · VANDERBILT UNIVERSITY · PI MIRNICS, KAROLY · 2003 to 2021
$4.7M
Uncovering complex expression patterns in schizophreniaK02MH070786 · NIMH · VANDERBILT UNIVERSITY · PI MIRNICS, KAROLY · 2004 to 2008
$527k
NIMH NIH HHS 2 P50 MH45156-14NIMH NIH HHS K02 MH070786NIMH NIH HHS R01 MH067234
6 · The paper itself

Abstract

Brain-derived neurotrophic factor (BDNF) has been reported to be critical for the development of cortical inhibitory neurons. However, the effect of BDNF on the expression of transcripts whose protein products are involved in gamma amino butric acid (GABA) neurotransmission has not been assessed. In this study, gene expression profiling using oligonucleotide microarrays was performed in prefrontal cortical tissue from mice with inducible deletions of BDNF. Both embryonic and adulthood ablation of BDNF gave rise to many shared transcriptome changes. BDNF appeared to be required to maintain gene expression in the SST-NPY-TAC1 subclass of GABA neurons, although the absence of BDNF did not alter their general phenotype as inhibitory neurons. Furthermore, we observed expression alterations in genes encoding early-immediate genes (ARC, EGR1, EGR2, FOS, DUSP1, DUSP6) and critical cellular signaling systems (CDKN1c, CCND2, CAMK1g, RGS4). These BDNF-dependent gene expression changes may illuminate the biological basis for transcriptome changes observed in certain human brain disorders.

Indexed as

Transcription, GeneticAnimalsBrain-Derived Neurotrophic FactorBrain DiseasesCrosses, GeneticDoxycyclinegamma-Aminobutyric AcidGene Expression ProfilingGene Expression Regulation, DevelopmentalGenes, Immediate-EarlyHumansImmediate-Early ProteinsInterneuronsIntracellular Signaling Peptides and ProteinsMiceMice, KnockoutBrain-Derived Neurotrophic FactorDoxycyclinegamma-Aminobutyric AcidImmediate-Early ProteinsIntracellular Signaling Peptides and ProteinsNerve Tissue ProteinsNeuropeptide YRecombinant Fusion ProteinsSomatostatin

Identifiers

PMID16702976
OpenAlexW2061038009

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.