Evidence map›Paper›PMID 16702437›Full record

ArticleGenetics2006

Fine-scale map of encyclopedia of DNA elements regions in the Korean population.

Yeon-Kyeong Yoo, Xiayi Ke, Sungwoo Hong, Hye-Yoon Jang, Kyunghee Park, Sook Kim, TaeJin Ahn, Yeun-Du Lee, Okryeol Song, Na-Young Rho and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 42 citations in OpenAlex.

  1. Identification and Functional Characterization of Novel Genetic Variations in the OCTN1 Promoter.The Korean journal of physiology & pharmacology : official journal of the Korean Physiological Society and the Korean Society of Pharmacology · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 3 countries.

Yeon-Kyeong YooDNA Link, Seoul, 120-110, Korea.
Xiayi Ke
Sungwoo Hong
Hye-Yoon Jang
Kyunghee Park
Sook Kim
TaeJin Ahn
Yeun-Du Lee
Okryeol Song
Na-Young Rho
Moon Sue Lee
Yeon-Su Lee
Jaeheup Kim
Young J Kim
Jun-Mo Yang
Kyuyoung Song
Kyuchan Kimm
Bruce Weir
Lon R Cardon
Jong-Eun Lee
Jung-Joo Hwang
DNA Link (South Korea) · KRCentre for Human Genetics · GBKorea National Institute of Health · KRKorea Research Institute of Bioscience and Biotechnology · KRSamsung Medical Center · KRSamsung (South Korea) · KRUniversity of Ulsan · KRUniversity of Washington · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

The International HapMap Project aims to generate detailed human genome variation maps by densely genotyping single-nucleotide polymorphisms (SNPs) in CEPH, Chinese, Japanese, and Yoruba samples. This will undoubtedly become an important facility for genetic studies of diseases and complex traits in the four populations. To address how the genetic information contained in such variation maps is transferable to other populations, the Korean government, industries, and academics have launched the Korean HapMap project to genotype high-density Encyclopedia of DNA Elements (ENCODE) regions in 90 Korean individuals. Here we show that the LD pattern, block structure, haplotype diversity, and recombination rate are highly concordant between Korean and the two HapMap Asian samples, particularly Japanese. The availability of information from both Chinese and Japanese samples helps to predict more accurately the possible performance of HapMap markers in Korean disease-gene studies. Tagging SNPs selected from the two HapMap Asian maps, especially the Japanese map, were shown to be very effective for Korean samples. These results demonstrate that the HapMap variation maps are robust in related populations and will serve as an important resource for the studies of the Korean population in particular.

Indexed as

Genome, HumanAsian PeopleChromosome MappingDatabases, Nucleic AcidDNAGenetics, PopulationGenotypeHumansKoreaLinkage DisequilibriumPolymorphism, Single NucleotideRecombination, GeneticDNA

Identifiers

PMID16702437
PMCPMC1569806
OpenAlexW2142448052

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.