Evidence map›Paper›PMID 16688706›Full record

ArticleChembiochem : a European journal of chemical biology2006

An efficient method for the synthesis of peptide aldehyde libraries employed in the discovery of reversible SARS coronavirus main protease (SARS-CoV Mpro) inhibitors.

Samer I Al-Gharabli, Syed T Ali Shah, Steffen Weik, Marco F Schmidt, Jeroen R Mesters, Daniel Kuhn, Gerhard Klebe, Rolf Hilgenfeld, Jörg Rademann

Open access · bronzeAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 62 citations in OpenAlex.

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  11. SARS-CoV-2 MBiomolecules · 2021
    Review
  12. Covalent Antiviral Agents.Advances in experimental medicine and biology · 2021
    Review
  13. The SARS-CoV-2 main protease as drug target.Bioorganic & medicinal chemistry letters · 2020
    Review
  14. Review
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Samer I Al-GharabliLeibniz Institut für Molekulare Pharmakologie (FMP), Department for Medicinal Chemistry, Berlin, Germany.
Syed T Ali Shah
Steffen Weik
Marco F Schmidt
Jeroen R Mesters
Daniel Kuhn
Gerhard Klebe
Rolf Hilgenfeld
Jörg Rademann
Leibniz-Forschungsinstitut für Molekulare Pharmakologie · DEPhilipps University of Marburg · DEUniversity of Lübeck · DEFreie Universität Berlin · DEGerman Jordanian University · JOLeibniz Institute for Neurobiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A method for the parallel solid-phase synthesis of peptide aldehydes has been developed. Protected amino acid aldehydes obtained by the racemization-free oxidation of amino alcohols with Dess-Martin periodinane were immobilized on threonyl resins as oxazolidines. Following Boc protection of the ring nitrogen to yield the N-protected oxazolidine linker, peptide synthesis was performed efficiently on this resin. A peptide aldehyde library was designed for targeting the SARS coronavirus main protease, SARS-CoV M(pro)(also known as 3CL(pro)), on the basis of three different reported binding modes and supported by virtual screening. A set of 25 peptide aldehydes was prepared by this method and investigated in inhibition assays against SARS-CoV M(pro). Several potent inhibitors were found with IC(50) values in the low micromolar range. An IC(50) of 7.5 muM was found for AcNSTSQ-H and AcESTLQ-H. Interestingly, the most potent inhibitors seem to bind to SARS-CoV M(pro) in a noncanonical binding mode.

Indexed as

Peptide LibraryAldehydesHumansMagnetic Resonance SpectroscopyMolecular Probe TechniquesProtease InhibitorsSevere acute respiratory syndrome-related coronavirusAldehydesPeptide LibraryProtease Inhibitors

Identifiers

PMID16688706
PMCPMC7417790
OpenAlexW2006995201

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.