ArticlePLoS computational biology2006
Practical strategies for discovering regulatory DNA sequence motifs.
Article in PLoS computational biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
63 citing papers in PubMed.
- Design and Testing of Root-Specific Synthetic Promoters by Machine Learning.International journal of molecular sciences · 2026Article
- InCURA: integrative gene clustering based on transcription factor binding sites.Nucleic acids research · 2025Article
- Alfin-like (AL) transcription factor family inBiotechnology reports (Amsterdam, Netherlands) · 2024Article
- Article
- Rational design and testing of abiotic stress-inducible synthetic promoters from poplar cis-regulatory elements.Plant biotechnology journal · 2021Article
- Machine learning: A powerful tool for gene function prediction in plants.Applications in plant sciences · 2020Review
- Biosynthesis, regulation, and engineering of microbially produced branched biofuels.Biotechnology for biofuels · 2019Review
- MODSIDE: a motif discovery pipeline and similarity detector.BMC genomics · 2018Article
- A novelGenome research · 2018Article
- A Collection of Conserved Noncoding Sequences to Study Gene Regulation in Flowering Plants.Plant physiology · 2016Article
- iFORM: Incorporating Find Occurrence of Regulatory Motifs.PloS one · 2016Article
- Mapping regulatory factors by immunoprecipitation from native chromatin.Current protocols in molecular biology · 2015Article
- Evolutionary Dynamics of GLD-1-mRNA complexes in Caenorhabditis nematodes.Genome biology and evolution · 2014Article
- Inference of transcriptional networks in Arabidopsis through conserved noncoding sequence analysis.The Plant cell · 2014Article
- DNA motif elucidation using belief propagation.Nucleic acids research · 2013Article
- Genes involved in thoracic exoskeleton formation during the pupal-to-adult molt in a social insect model, Apis mellifera.BMC genomics · 2013Article
- A temperature-responsive network links cell shape and virulence traits in a primary fungal pathogen.PLoS biology · 2013Article
- PreCisIon: PREdiction of CIS-regulatory elements improved by gene's positION.Nucleic acids research · 2013Article
- Education in computational biology today and tomorrow.PLoS computational biology · 2013Article
- Moving education forward, again!PLoS computational biology · 2013Article
3 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
PubMed holds no abstract for this paper.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.