Evidence map›Paper›PMID 16682353›Full record

ArticleCurrent biology : CB2006

Phenotypic variation and natural selection at catsup, a pleiotropic quantitative trait gene in Drosophila.

Mary Anna Carbone, Katherine W Jordan, Richard F Lyman, Susan T Harbison, Jeff Leips, Theodore J Morgan, Maria DeLuca, Philip Awadalla, Trudy F C Mackay

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
13.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Genetics of adaptation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. The road less traveled: from genotype to phenotype in flies and humans.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  15. Article
  16. Review
  17. Genetic approaches in comparative and evolutionary physiology.American journal of physiology. Regulatory, integrative and comparative physiology · 2015
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Mary Anna CarboneDepartment of Genetics, North Carolina State University, Raleigh, North Carolina 27695, USA.
Katherine W Jordan
Richard F Lyman
Susan T Harbison
Jeff Leips
Theodore J Morgan
Maria DeLuca
Philip Awadalla
Trudy F C Mackay
North Carolina State University · USUniversity of Maryland, Baltimore County · US

Funding

THEORETICAL QUANTITATIVE GENETICSP01GM045344 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MACKAY, TRUDY F · 1991 to 2005
$7.2M
QUANTITATIVE TRAIT LOCI IN DROSOPHILAR01GM045146 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 1991 to 2012
$5.1M
NIGMS NIH HHS P01 GM045344NIGMS NIH HHS R01 GM045146
6 · The paper itself

Abstract

Quantitative traits are shaped by networks of pleiotropic genes . To understand the mechanisms that maintain genetic variation for quantitative traits in natural populations and to predict responses to artificial and natural selection, we must evaluate pleiotropic effects of underlying quantitative trait genes and define functional allelic variation at the level of quantitative trait nucleotides (QTNs). Catecholamines up (Catsup), which encodes a negative regulator of tyrosine hydroxylase , the rate-limiting step in the synthesis of the neurotransmitter dopamine, is a pleiotropic quantitative trait gene in Drosophila melanogaster. We used association mapping to determine whether the same or different QTNs at Catsup are associated with naturally occurring variation in multiple quantitative traits. We sequenced 169 Catsup alleles from a single population and detected 33 polymorphisms with little linkage disequilibrium (LD). Different molecular polymorphisms in Catsup are independently associated with variation in longevity, locomotor behavior, and sensory bristle number. Most of these polymorphisms are potentially functional variants in protein coding regions, have large effects, and are not common. Thus, Catsup is a pleiotropic quantitative trait gene, but individual QTNs do not have pleiotropic effects. Molecular population genetic analyses of Catsup sequences are consistent with balancing selection maintaining multiple functional polymorphisms.

Indexed as

Genetic VariationPhenotypeQuantitative Trait LociSelection, GeneticAnimalsCatecholaminesDrosophilaDrosophila melanogasterDrosophila ProteinsFemaleGenotypeLongevityMaleMolecular Sequence DataMotor ActivityQuantitative Trait, HeritableCatecholaminescatsup protein, DrosophilaDrosophila Proteins

Identifiers

PMID16682353
PMCPMC10766118
OpenAlexW1982717582

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.