ArticleBiophysical journal2006
Kinetic measurement of transient dimerization and dissociation reactions of Arabidopsis phototropin 1 LOV2 domain.
Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed.
- Structural dynamics of protein-protein association involved in the light-induced transition of Avena sativa LOV2 protein.Nature communications · 2024Article
- Time-resolved detection of association/dissociation reactions and conformation changes in photosensor proteins for application in optogenetics.Biophysical reviews · 2021Review
- Aureochrome 1 illuminated: structural changes of a transcription factor probed by molecular spectroscopy.PloS one · 2014Article
- Coiled-coil dimerization of the LOV2 domain of the blue-light photoreceptor phototropin 1 from Arabidopsis thaliana.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013Article
- LOV domain-containing F-box proteins: light-dependent protein degradation modules in Arabidopsis.Molecular plant · 2012Review
- Light-induced conformational changes in full-length Arabidopsis thaliana cryptochrome.Journal of molecular biology · 2011Article
- Transient dissociation of the transducer protein from anabaena sensory rhodopsin concomitant with formation of the M state produced upon photoactivation.Journal of the American Chemical Society · 2011Article
- Function, structure and mechanism of bacterial photosensory LOV proteins.Nature reviews. Microbiology · 2011Review
- Photoreactions of aureochrome-1.Biophysical journal · 2011Article
- Light-induced conformational change and product release in DNA repair by (6-4) photolyase.Journal of the American Chemical Society · 2011Article
- Tripping the light fantastic: blue-light photoreceptors as examples of environmentally modulated protein-protein interactions.Biochemistry · 2011Review
- Light-induced structural changes of the LOV2 domains in various phototropins revealed by FTIR spectroscopy.Biophysics (Nagoya-shi, Japan) · 2011Review
- Kinetics of conformational changes of the FKF1-LOV domain upon photoexcitation.Biophysical journal · 2010Article
- Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria.The Journal of biological chemistry · 2010Article
- Building blocks for protein interaction devices.Nucleic acids research · 2010Article
- Illuminating solution responses of a LOV domain protein with photocoupled small-angle X-ray scattering.Journal of molecular biology · 2009Article
- Reaction dynamics of halorhodopsin studied by time-resolved diffusion.Biophysical journal · 2009Article
- Light signal transduction pathway from flavin chromophore to the J alpha helix of Arabidopsis phototropin1.Biophysical journal · 2009Article
- Time-resolved dimerization of a PAS-LOV protein measured with photocoupled small angle X-ray scattering.Journal of the American Chemical Society · 2008Article
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5 authors.
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Abstract
Photochemical reaction of a plant blue-light photoreceptor, Arabidopsis phototropin 1-LOV (light-oxygen-voltage sensing) domain 2, was studied with a view to the diffusion coefficients (D) using the pulsed-laser-induced transient grating method. Although the reaction dynamics completes at a rate of several microseconds as long as it is monitored by the absorption change, the diffusion coefficient was found to be time-dependent in a time range of submilliseconds to seconds. The observed signal can be analyzed by the two-state model, which includes the D-value decrease from D of the reactant (9.8 +/- 0.4) x 10(-11) m2/s to D of the product (8.0 +/- 0.4) x 10(-11) m2/s. The D-value of the reactant implies that the dominant form in the ground state of phototropin 1 LOV2 is the monomeric form in a concentration range of 50-200 microM. According to the Stokes-Einstein relationship, the D-change can be explained by a volume increase of 1.8 times. Furthermore, the rate of the D-change was roughly proportional to the concentration of the sample. These two observations indicate that the LOV2 domain transiently forms a dimer upon photoexcitation. When the sample concentration is increased (>180 microM), a new signal component appears within a few milliseconds. This signal represents a D increase from 8.0 x 10(-11) m2/s to 9.8 x 10(-11) m2/s with a time constant of 300 micros. The completely opposite D-change from that observed in a lower concentration, as well as the concentration dependence, implies that a dimer is formed in the ground state in a higher concentration range, even though the fraction of the dimer is still minor in this range. This dimer is photodissociated, with a time constant of 300 micros. This research clearly shows that the time-resolved diffusion measurement is a very powerful tool for detecting spectrally silent association/dissociation processes during chemical reactions. The photoreaction of the LOV2 domain is discussed.
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