ArticleApplied and environmental microbiology2006
Development and validation of an oligonucleotide microarray for detection of multiple virulence and antimicrobial resistance genes in Escherichia coli.
Article in Applied and environmental microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
43 citing papers in PubMed, 94 citations in OpenAlex.
- To kill or to be killed: pangenome analysis of Escherichia coli strains reveals a tailocin specific for pandemic ST131.BMC biology · 2022Article
- An evaluation of multidrug-resistant Escherichia coli isolates in urinary tract infections from Aguascalientes, Mexico: cross-sectional study.Annals of clinical microbiology and antimicrobials · 2018Article
- Phylogroup and virulence gene association with clinical characteristics of Escherichia coli urinary tract infections from dogs and cats.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2018Article
- A Fatal Case of Necrotizing Fasciitis Caused by a Highly Virulent Escherichia coli Strain.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2016Article
- Distribution of Shiga toxin genes subtypes in B1 phylotypes of Escherichia coli isolated from calves suffering from diarrhea in Tehran suburb using DNA oligonucleotide arrays.Iranian journal of microbiology · 2015Article
- Leucine-responsive regulatory protein Lrp and PapI homologues influence phase variation of CS31A fimbriae.Journal of bacteriology · 2014Article
- Impact of UV and peracetic acid disinfection on the prevalence of virulence and antimicrobial resistance genes in uropathogenic Escherichia coli in wastewater effluents.Applied and environmental microbiology · 2014Article
- Global dissemination of a multidrug resistant Escherichia coli clone.Proceedings of the National Academy of Sciences of the United States of America · 2014Article
- Characterization of antimicrobial resistance patterns and detection of virulence genes in Campylobacter isolates in Italy.Sensors (Basel, Switzerland) · 2014Article
- Application of microarray technology for the detection of intracranial bacterial infection.Experimental and therapeutic medicine · 2014Article
- The PathoChip, a functional gene array for assessing pathogenic properties of diverse microbial communities.The ISME journal · 2013Article
- Pathotyping bla CTX-M Escherichia coli from Nigeria.European journal of microbiology & immunology · 2013Article
- Identification of potentially diarrheagenic atypical enteropathogenic Escherichia coli strains present in Canadian food animals at slaughter and in retail meats.Applied and environmental microbiology · 2013Article
- Evaluating the pathogenic potential of environmental Escherichia coli by using the Caenorhabditis elegans infection model.Applied and environmental microbiology · 2013Article
- Biological and physicochemical wastewater treatment processes reduce the prevalence of virulent Escherichia coli.Applied and environmental microbiology · 2013Article
- Detection and genotyping of Campylobacter jejuni and Campylobacter coli by use of DNA oligonucleotide arrays.Molecular biotechnology · 2013Article
- Presence of multi-drug resistant pathogenic Escherichia coli in the San Pedro River located in the State of Aguascalientes, Mexico.Frontiers in microbiology · 2013Article
- One test microbial diagnostic microarray for identification of Mycoplasma mycoides subsp. mycoides and other Mycoplasma species.Molecular biotechnology · 2012Article
- Genetic characterization of Escherichia coli O157:H7 strains isolated from the one-humped camel (Camelus dromedarius) by using microarray DNA technology.Molecular biotechnology · 2012Article
- Multiplex PCR-based reverse line blot assay for simultaneous detection of 22 virulence genes in uropathogenic Escherichia coli.Applied and environmental microbiology · 2012Article
Corrections and comments
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Authors and funding
7 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
An oligonucleotide microarray detecting 189 Escherichia coli virulence genes or markers and 30 antimicrobial resistance genes was designed and validated using DNA from known reference strains. This microarray was confirmed to be a powerful diagnostic tool for monitoring emerging E. coli pathotypes and antimicrobial resistance, as well as for environmental, epidemiological, and phylogenetic studies including the evaluation of genome plasticity.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.