Evidence map›Paper›PMID 16672232›Full record

ArticleProtein science : a publication of the Protein Society2006

Protein SRP68 of human signal recognition particle: identification of the RNA and SRP72 binding domains.

Elena Iakhiaeva, Shakhawat Hossain Bhuiyan, Jiaming Yin, Christian Zwieb

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Elena IakhiaevaDepartment of Molecular Biology, University of Texas Health Science Center at Tyler, Tyler, Texas 75708-3154, USA.
Shakhawat Hossain Bhuiyan
Jiaming Yin
Christian Zwieb
The University of Texas Health Science Center at Tyler · US

Funding

STRUCTURE/FUNCTION OF SRP RNAR01GM049034 · NIGMS · UNIVERSITY OF TEXAS HLTH CTR AT TYLER · PI ZWIEB, CHRISTIAN WOLFGANG · 1995 to 2006
$1.2M
NIGMS NIH HHS GM-49034NIGMS NIH HHS R01 GM049034
6 · The paper itself

Abstract

The signal recognition particle (SRP) plays an important role in the delivery of secretory proteins to cellular membranes. Mammalian SRP is composed of six polypeptides among which SRP68 and SRP72 form a heterodimer that has been notoriously difficult to investigate. Human SRP68 was purified from overexpressing Escherichia coli cells and was found to bind to recombinant SRP72 as well as in vitro-transcribed human SRP RNA. Polypeptide fragments covering essentially the entire SRP68 molecule were generated recombinantly or by proteolytic digestion. The RNA binding domain of SRP68 included residues from positions 52 to 252. Ninety-four amino acids near the C terminus of SRP68 mediated the binding to SRP72. The SRP68-SRP72 interaction remained stable at elevated salt concentrations and engaged approximately 150 amino acids from the N-terminal region of SRP72. This portion of SRP72 was located within a predicted tandem array of four tetratricopeptide (TPR)-like motifs suggested to form a superhelical structure with a groove to accommodate the C-terminal region of SRP68.

Indexed as

Base SequenceBinding SitesCloning, MolecularHumansMolecular Sequence DataPhylogenyProtein ConformationProtein Structure, TertiaryRecombinant ProteinsRNASignal Recognition ParticleRecombinant ProteinsRNASignal Recognition ParticleSRP68 protein, humanSRP72 protein, human

Identifiers

PMID16672232
PMCPMC2242529
OpenAlexW2094010977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.