Evidence map›Paper›PMID 16670198›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

XRCC4 suppresses medulloblastomas with recurrent translocations in p53-deficient mice.

Catherine T Yan, Dhruv Kaushal, Michael Murphy, Yu Zhang, Abhishek Datta, Changzhong Chen, Brianna Monroe, Gustavo Mostoslavsky, Kristen Coakley, Yijie Gao and 10 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 118 citations in OpenAlex.

  1. Article
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  8. Article
  9. The origin of unwanted editing byproducts in gene editing.Acta biochimica et biophysica Sinica · 2022
    Article
  10. Review
  11. Review
  12. Induction of recurrent break cluster genes in neural progenitor cells differentiated from embryonic stem cells in culture.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Modeling pediatric medulloblastoma.Brain pathology (Zurich, Switzerland) · 2020
    Review
  14. Article
  15. Review
  16. Differential expression of DNA-dependent protein kinase catalytic subunit in the brain of neonatal mice and young adult mice.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2020
    Article
  17. Article
  18. Article
  19. Molecular biology of the cell · 2019
    Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 1 country.

Catherine T YanHoward Hughes Medical Institute, The Children's Hospital, CBR Institute for Biomedical Research, Harvard Medical School, Boston, MA 02115, USA.
Dhruv Kaushal
Michael Murphy
Yu Zhang
Abhishek Datta
Changzhong Chen
Brianna Monroe
Gustavo Mostoslavsky
Kristen Coakley
Yijie Gao
Kevin D Mills
Alex P Fazeli
Suprawee Tepsuporn
Giles Hall
Richard Mulligan
Edward Fox
Roderick Bronson
Umberto De Girolami
Charles Lee
Frederick W Alt
Howard Hughes Medical Institute · USHarvard University · USBrigham and Women's Hospital · USDana-Farber Cancer Institute · USPediatrics and Genetics · US

Funding

Postdoctoral Training Program in Cancer ImmunologyT32CA070083 · NCI · DANA-FARBER CANCER INSTITUTE · PI CANTOR, HARVEY · 1997 to 2012
$2.8M
NCI NIH HHS 1P01-CA10990NCI NIH HHS T32 CA070083NCI NIH HHS T32 CA70083
6 · The paper itself

Abstract

Inactivation of the XRCC4 nonhomologous end-joining factor in the mouse germ line leads to embryonic lethality, in association with apoptosis of newly generated, postmitotic neurons. We now show that conditional inactivation of the XRCC4 in nestin-expressing neuronal progenitor cells, although leading to no obvious phenotype in a WT background, leads to early onset of neuronally differentiated medulloblastomas (MBs) in a p53-deficient background. A substantial proportion of the XRCC4/p53-deficient MBs have high-level N-myc gene amplification, often intrachromosomally in the context of complex translocations or other alterations of chromosome 12, on which N-myc resides, or extrachromosomally within double minutes. In addition, most XRCC4/p53-deficient MBs harbor clonal translocations of chromosome 13, which frequently involve chromosome 6 as a partner. One copy of the patched gene (Ptc), which lies on chromosome 13, was deleted in all tested XRCC4/p53-deficient MBs in the context of translocations or interstitial deletions. In addition, Cyclin D2, a chromosome 6 gene, was amplified in a subset of tumors. Notably, amplification of Myc-family or Cyclin D2 genes and deletion of Ptc also have been observed in human MBs. We therefore conclude that, in neuronal cells of mice, the nonhomologous end-joining pathway plays a critical role in suppressing genomic instability that, in a p53-deficient background, routinely contributes to genesis of MBs with recurrent chromosomal alterations.

Indexed as

AllelesAnimalsDNA-Binding ProteinsDown-RegulationGene AmplificationIntermediate Filament ProteinsMedulloblastomaMiceMice, KnockoutNerve Tissue ProteinsNestinSurvival RateTime FactorsTranslocation, GeneticTumor Cells, CulturedTumor Suppressor Protein p53DNA-Binding ProteinsIntermediate Filament ProteinsNerve Tissue ProteinsNES protein, humanNes protein, mouseNestinTumor Suppressor Protein p53XRCC4 protein, mouse

Identifiers

PMID16670198
PMCPMC1464348
OpenAlexW1988225111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.