Evidence map›Paper›PMID 16652348›Full record

ArticleHuman mutation2006

The ATM missense mutation p.Ser49Cys (c.146C>G) and the risk of breast cancer.

Denise L Stredrick, Montserrat Garcia-Closas, Marbin A Pineda, Parveen Bhatti, Bruce H Alexander, Michele M Doody, Jolanta Lissowska, Beata Peplonska, Louise A Brinton, Stephen J Chanock and 2 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Pooled it
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  7. Poorly differentiated thyroid carcinoma of childhood and adolescence: a distinct entity characterized by DICER1 mutations.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2020
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  16. Genomic Biomarkers for Breast Cancer Risk.Advances in experimental medicine and biology · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Denise L StredrickLaboratory of Population Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892-5060, USA.
Montserrat Garcia-Closas
Marbin A Pineda
Parveen Bhatti
Bruce H Alexander
Michele M Doody
Jolanta Lissowska
Beata Peplonska
Louise A Brinton
Stephen J Chanock
Jeffery P Struewing
Alice J Sigurdson
National Institutes of Health · USNational Cancer Institute · USNofer Institute of Occupational Medicine · PLThe Maria Sklodowska-Curie National Research Institute of Oncology · PLUniversity of Minnesota · US

Funding

STUDIES ON POPULATIONS EXPOSED TO OCCUPATIONAL SOURCES OF RADIATIONZ01CP010133 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI LINET, MARTHA S. · 1996 to 2008
$2.2M
MOLECULAR STUDY OF HOST RESPONSE/GENETIC RISK FACTORS OF INFECTION COMPLICATIONZ01SC010083 · SC · CLINICAL SCIENCES · PI CHANOCK, STEPHEN J · 1997 to 2007
$1.1M
Genetic Epidemiology of BRCA12Z01CP010138 · NCI · CANCER EPIDEMIOLOGY AND GENETICS · PI STRUEWING, JEFFERY P · 1999 to 2007
$252k
Genetic /epidemiologic /biochemical studies--DNA repairZ01CP010157 · NCI · CANCER EPIDEMIOLOGY AND GENETICS · PI STRUEWING, JEFFERY P · 2001 to 2007
$228k
Intramural NIH HHSNCI NIH HHS Z01 CP010157-05
6 · The paper itself

Abstract

Homozygous mutation in the ATM gene causes ataxia telangiectasia and heterozygous mutation carriers may be at increased risk of breast cancer. We studied a total of 22 ATM variants; 18 variants were analyzed in one of two large population-based studies from the U.S. and Poland, and four variants were analyzed in all 2,856 breast cancer cases and 3,344 controls from the two studies. The missense mutation Ser49Cys (c.146C>G, p.S49C), carried by approximately 2% of subjects, was more common in cases than controls in both study populations, combined odds ratio (OR) 1.69 (95% CI, 1.19-2.40; P=0.004). Another missense mutation at approximately 2% frequency, Phe858Leu (c.2572T>C, p.F858L), was associated with a significant increased risk in the U.S. study but not in Poland, and had a combined OR of 1.44 (95% CI, 0.98-2.11; P=0.06). These analyses provide the most convincing evidence thus far that missense mutations in ATM, particularly p.S49C, may be breast cancer susceptibility alleles. Because of their low frequency, even larger sample sizes are required to more firmly establish these associations.

Indexed as

Mutation, MissenseAdultAgedAllelesAtaxia Telangiectasia Mutated ProteinsBreast NeoplasmsCase-Control StudiesCell Cycle ProteinsDNA-Binding ProteinsFemaleGenetic Predisposition to DiseaseHumansMiddle AgedPolandProtein Serine-Threonine KinasesRisk FactorsAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDNA-Binding ProteinsProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID16652348
PMCPMC1850333
OpenAlexW2040693004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.