Evidence map›Paper›PMID 16652147›Full record

ArticleOncogene2006

RUNX1 associates with histone deacetylases and SUV39H1 to repress transcription.

E Reed-Inderbitzin, I Moreno-Miralles, S K Vanden-Eynden, J Xie, B Lutterbach, K L Durst-Goodwin, K S Luce, B J Irvin, M L Cleary, S J Brandt and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 85 citations in OpenAlex.

  1. RUNX1 is a mediator of fibrotic activation and epigenetic memory in lung fibroblasts.American journal of respiratory cell and molecular biology · 2026
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  16. RUNX1: A Regulator of NF-kB Signaling in Pulmonary Diseases.Current protein & peptide science · 2018
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

E Reed-InderbitzinDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.
I Moreno-Miralles
S K Vanden-Eynden
J Xie
B Lutterbach
K L Durst-Goodwin
K S Luce
B J Irvin
M L Cleary
S J Brandt
S W Hiebert
Vanderbilt University · USPalo Alto University · USVA Tennessee Valley Healthcare System · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Role of AML1-ETO in Acute LeukemiaR01CA064140 · NCI · VANDERBILT UNIVERSITY · PI HIEBERT, SCOTT W · 1994 to 2018
$5.7M
REGULATION AND FUNCTION OF THE TAL1/SCL GENER01HL049118 · NHLBI · VANDERBILT UNIVERSITY · PI BRANDT, STEPHEN J. · 1998 to 2011
$2.4M
TEL AND THE T(12--21) AND B CELL ALLR01CA077274 · NCI · VANDERBILT UNIVERSITY · PI HIEBERT, SCOTT W · 1997 to 2006
$2.1M
NCI NIH HHS CA68485NCI NIH HHS R01-CA64140NCI NIH HHS R01-CA77274NHLBI NIH HHS R01-HL49118PHS HHS R01-87549
6 · The paper itself

Abstract

RUNX1 (AML1) is a gene that is frequently disrupted by chromosomal translocations in acute leukemia. Like its Drosophila homolog Runt, RUNX1 both activates and represses transcription. Both Runt and RUNX1 are required for gene silencing during development and a central domain of RUNX1, termed repression domain 2 (RD2), was defined as being required for transcriptional repression and for the silencing of CD4 during T-cell maturation in thymic organ cultures. Although transcriptional co-repressors are known to contact other repression domains in RUNX1, the factors that bind to RD2 had not been defined. Therefore, we tested whether RD2 contacts histone-modifying enzymes that may mediate both repression and gene silencing. We found that RD2 contacts SUV39H1, a histone methyltransferase, via two motifs and that endogenous Suv39h1 associates with a Runx1-regulated repression element in murine erythroleukemia cells. In addition, one of these SUV39H1-binding motifs is also sufficient for binding to histone deacetylases 1 and 3, and both of these domains are required for full RUNX1-mediated transcriptional repression. The association between RUNX1, histone deacetylases and SUV39H1 provides a molecular mechanism for repression and possibly gene silencing mediated by RUNX1.

Indexed as

AnimalsChlorocebus aethiopsCore Binding Factor Alpha 2 SubunitCOS CellsHistone DeacetylasesHumansJurkat CellsMethyltransferasesRepressor ProteinsTransfectionCore Binding Factor Alpha 2 SubunitHistone DeacetylasesMethyltransferasesRepressor ProteinsRUNX1 protein, humanSUV39H1 protein, human

Identifiers

PMID16652147
OpenAlexW1992391979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.