Evidence map›Paper›PMID 16648487›Full record

ArticleMolecular and cellular biology2006

Functional interaction of CP2 with GATA-1 in the regulation of erythroid promoters.

Francesca Bosè, Cristina Fugazza, Maura Casalgrandi, Alessia Capelli, John M Cunningham, Quan Zhao, Stephen M Jane, Sergio Ottolenghi, Antonella Ronchi

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Francesca BosèDipartimento di Biotecnologie e Bioscienze, Università di Milano-Bicocca, P.za della Scienza 2, 20126 Milano, Italy.
Cristina Fugazza
Maura Casalgrandi
Alessia Capelli
John M Cunningham
Quan Zhao
Stephen M Jane
Sergio Ottolenghi
Antonella Ronchi
University of Milano-Bicocca · ITThe Royal Melbourne Hospital · AUSt. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
VIROSOME/PROTEOLIPOSOME MEDIATED GENE TRANSFERP01HL053749 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI WEISS, MITCHELL J · 1994 to 2022
$43.6M
Role of LBP-1a and p14 NF-E4 in gamma globin gene expre*R01HL069232 · NHLBI · ROYAL MELBOURNE HOSPITAL · PI JANE, STEPHEN M. · 2001 to 2004
$700k
NCI NIH HHS P30 CA021765NCI NIH HHS P30 CA 21765NHLBI NIH HHS P01 HL053749NHLBI NIH HHS P01 HL53749-03NHLBI NIH HHS R01 HL069232NHLBI NIH HHS R01 HL69232-01
6 · The paper itself

Abstract

We observed that binding sites for the ubiquitously expressed transcription factor CP2 were present in regulatory regions of multiple erythroid genes. In these regions, the CP2 binding site was adjacent to a site for the erythroid factor GATA-1. Using three such regulatory regions (from genes encoding the transcription factors GATA-1, EKLF, and p45 NF-E2), we demonstrated the functional importance of the adjacent CP2/GATA-1 sites. In particular, CP2 binds to the GATA-1 HS2 enhancer, generating a ternary complex with GATA-1 and DNA. Mutations in the CP2 consensus greatly impaired HS2 activity in transient transfection assays with K562 cells. Similar results were obtained by transfection of EKLF and p45 NF-E2 mutant constructs. Chromatin immunoprecipitation with K562 cells showed that CP2 binds in vivo to all three regulatory elements and that both GATA-1 and CP2 were present on the same GATA-1 and EKLF regulatory elements. Adjacent CP2/GATA-1 sites may represent a novel module for erythroid expression of a number of genes. Additionally, coimmunoprecipitation and glutathione S-transferase pull-down experiments demonstrated a physical interaction between GATA-1 and CP2. This may contribute to the functional cooperation between these factors and provide an explanation for the important role of ubiquitous CP2 in the regulation of erythroid genes.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticAmino Acid MotifsAmino Acid SequenceBase SequenceBinding SitesChromatin ImmunoprecipitationElectrophoretic Mobility Shift AssayEnhancer Elements, GeneticGATA1 Transcription FactorGenes, RegulatorGenes, ReporterGlutathione TransferaseHumansK562 CellsKruppel-Like Transcription FactorsGATA1 Transcription FactorGlutathione TransferaseKruppel-Like Transcription FactorsLuciferasesNF-E2 Transcription Factor, p45 SubunitRecombinant Fusion ProteinsRepressor ProteinsTFCP2L1 protein, humanTranscription Factors

Identifiers

PMID16648487
PMCPMC1489008
OpenAlexW2152094817

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.