Evidence map›Paper›PMID 16648219›Full record

ArticlePlant physiology2006

Aging in legume symbiosis. A molecular view on nodule senescence in Medicago truncatula.

Willem Van de Velde, Juan Carlos Pérez Guerra, Annick De Keyser, Riet De Rycke, Stéphane Rombauts, Nicolas Maunoury, Peter Mergaert, Eva Kondorosi, Marcelle Holsters, Sofie Goormachtig

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 250 citations in OpenAlex.

  1. Article
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  9. Cyclic Isothiocyanate Goitrin ImpairsPlants (Basel, Switzerland) · 2024
    Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Signaling in Legume-Rhizobia Symbiosis.International journal of molecular sciences · 2023
    Review
  15. Effects of Elevated Temperature onInternational journal of molecular sciences · 2023
    Article
  16. Effects of Elevated Temperature onInternational journal of molecular sciences · 2023
    Article
  17. Article
  18. Article
  19. Review
  20. Article

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Willem Van de VeldeDepartment of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University, B-9052 Gent, Belgium.
Juan Carlos Pérez Guerra
Annick De Keyser
Riet De Rycke
Stéphane Rombauts
Nicolas Maunoury
Peter Mergaert
Eva Kondorosi
Marcelle Holsters
Sofie Goormachtig
Ghent University · BEInstitut des Sciences du Végétal · FRVlaams Instituut voor Biotechnologie · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhizobia reside as symbiosomes in the infected cells of legume nodules to fix atmospheric nitrogen. The symbiotic relation is strictly controlled, lasts for some time, but eventually leads to nodule senescence. We present a comprehensive transcriptomics study to understand the onset of nodule senescence in the legume Medicago truncatula. Distinct developmental stages with characteristic gene expression were delineated during which the two symbiotic partners were degraded consecutively, marking the switch in nodule tissue status from carbon sink to general nutrient source. Cluster analysis discriminated an early expression group that harbored regulatory genes that might be primary tools to interfere with pod filling-related or stress-induced nodule senescence, ultimately causing prolonged nitrogen fixation. Interestingly, the transcriptomes of nodule and leaf senescence had a high degree of overlap, arguing for the recruitment of similar pathways.

Indexed as

SymbiosisCluster AnalysisDNA, ComplementaryFabaceaeMedicagoMolecular Sequence DataPlant RootsReverse Transcriptase Polymerase Chain ReactionDNA, Complementary

Identifiers

PMID16648219
PMCPMC1475454
OpenAlexW1896972102

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.