Evidence map›Paper›PMID 16636269›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Electron microscopic structure of purified, active gamma-secretase reveals an aqueous intramembrane chamber and two pores.

Vlado K Lazarov, Patrick C Fraering, Wenjuan Ye, Michael S Wolfe, Dennis J Selkoe, Huilin Li

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 160 citations in OpenAlex.

  1. Review
  2. γ-Secretase in Alzheimer's disease.Experimental & molecular medicine · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Structural and Chemical Biology of Presenilin Complexes.Cold Spring Harbor perspectives in medicine · 2017
    Review
  7. Review
  8. Nicastrin functions to sterically hinder γ-secretase-substrate interactions driven by substrate transmembrane domain.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  9. Article
  10. Structural basis of human γ-secretase assembly.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  11. Article
  12. Structural biology of presenilin 1 complexes.Molecular neurodegeneration · 2014
    Review
  13. Crystal structure of the γ-secretase component nicastrin.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. The γ-secretase complex: from structure to function.Frontiers in cellular neuroscience · 2014
    Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Vlado K LazarovBiology Department, Brookhaven National Laboratory, Upton, NY 11973, USA.
Patrick C Fraering
Wenjuan Ye
Michael S Wolfe
Dennis J Selkoe
Huilin Li
Harvard University · USBrookhaven National Laboratory · USBrigham and Women's Hospital · US

Funding

Gamma-Secretase: Structure of an Intramembrane ProteaseR01AG029979 · NIA · VAN ANDEL RESEARCH INSTITUTE · PI LI, HUILIN · 2011 to 2015
$1.9M
NIA NIH HHS AG1537NIA NIH HHS R01 AG029979
6 · The paper itself

Abstract

Gamma-secretase is an intramembrane-cleaving aspartyl protease required for the normal development of metazoans because it processes Notch within cellular membranes to release its signaling domain. More than two dozen additional substrates of diverse functions have been reported, including the Notch ligands Delta and Jagged, N- and E-cadherins, and a sodium channel subunit. The protease is causally implicated in Alzheimer's disease because it releases the neurotoxic amyloid beta-peptide (Abeta) from its precursor, APP. Gamma-secretase occurs as a large complex containing presenilin (bearing the active site aspartates), nicastrin, Aph-1, and Pen-2. Because the complex contains at least 18 transmembrane domains, crystallographic approaches to its structure are difficult and remote. We recently purified the human complex essentially to homogeneity from stably expressing mammalian cells. Here, we use EM and single-particle image analysis on the purified enzyme, which produces physiological ratios of Abeta40 and Abeta42, to obtain structural information on an intramembrane protease. The 3D EM structure revealed a large, cylindrical interior chamber of approximately 20-40 A in length, consistent with a proteinaceous proteolytic site that is occluded from the hydrophobic environment of the lipid bilayer. Lectin tagging of the nicastrin ectodomain enabled proper orientation of the globular, approximately 120-A-long complex within the membrane and revealed approximately 20-A pores at the top and bottom that provide potential exit ports for cleavage products to the extra- and intracellular compartments. Our reconstructed 3D map provides a physical basis for hydrolysis of transmembrane substrates within a lipid bilayer and release of the products into distinct subcellular compartments.

Indexed as

EndopeptidasesProtein Structure, TertiaryAmyloid Precursor Protein SecretasesAnimalsAspartic Acid EndopeptidasesConcanavalin AHumansImage Processing, Computer-AssistedMicroscopy, ElectronModels, MolecularMultiprotein ComplexesAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesBACE1 protein, humanConcanavalin AEndopeptidasesMultiprotein Complexes

Identifiers

PMID16636269
PMCPMC1458989
OpenAlexW2158354144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.