Evidence map›Paper›PMID 16630140›Full record

ArticleCancer science2006

Identification of secernin 1 as a novel immunotherapy target for gastric cancer using the expression profiles of cDNA microarray.

Takako Suda, Takuya Tsunoda, Naotaka Uchida, Takeshi Watanabe, Suguru Hasegawa, Seiji Satoh, Shigetsugu Ohgi, Yoichi Furukawa, Yusuke Nakamura, Hideaki Tahara

4 registry-linked trialsOpen access · bronzeAbstract read
In one paragraph

Article in Cancer science, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 4 registered trials, which are not on this map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00632333 phase1unknown statusnot on this mapstarted 2008, after this paper: background citation

Phase I Study of Chemoradiation Therapy With Epitope Peptide Vaccine Therapy in Treating Patients With Unresectable, Advanced or Recurrent Esophageal Cancer

TypeinterventionalSponsorTeikyo UniversityRan2008 to 2012Enrolled9ConditionsEsophageal CancerArmsURLC10, TTK, KOC1, VEGFR1, VEGFR2, cisplatin, fluorouracil
NCT00633724 phase1completednot on this mapstarted 2007, after this paper: background citation

Phase I Study of Multiple-vaccine Therapy Including Antiangiogenic Vaccine Using Epitope Peptide Restricted to HLA-A*2402 in Treating Patients With Unresectable or Recurrent Non-small Cell Lung Cancer

TypeinterventionalSponsorFukushima Medical UniversityRan2007 to 2012Enrolled9ConditionsNon Small Cell Lung CancerArmsHLA-A*2402restricted URLC10, TTK, VEGFR1 and VEGFR2
NCT00673777 phase1 / phase2unknown statusnot on this mapstarted 2008, after this paper: background citation

Phase I/II Study of Multiple-Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*0201 in Treating Patients With Refractory Non-Small Cell Lung Cancer

TypeinterventionalSponsorTokyo UniversityRan2008 to 2009Enrolled14ConditionsNon Small Cell Lung CancerArmsURLC10, VEGFR1 and VEGFR2
NCT00674258 phase1 / phase2unknown statusnot on this mapstarted 2008, after this paper: background citation

Phase I/II Study of Multiple-Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*0201 in Treating Patients With Refractory Non-Small Cell Lung Cancer

TypeinterventionalSponsorTokyo UniversityRan2008 to 2009Enrolled14ConditionsNon Small Cell Lung CancerArmsURLC10, TTK and KOC1
3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Identification of RAB2A and PRDX1 as the potential biomarkers for oral squamous cell carcinoma using mass spectrometry-based comparative proteomic approach.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Proteomic analysis of soft tissue sarcoma.International journal of clinical oncology · 2011
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Takako SudaDepartment of Surgery and Bioengineering, Institute of Medical Science, The University of Tokyo, 4-6-1, Shirokanedai, Minato-ku, Tokyo 108-8639, Japan.
Takuya Tsunoda
Naotaka Uchida
Takeshi Watanabe
Suguru Hasegawa
Seiji Satoh
Shigetsugu Ohgi
Yoichi Furukawa
Yusuke Nakamura
Hideaki Tahara
The University of Tokyo · JPKyoto University · JPSystems Biology Institute · JPTottori University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the discovery of multiple TAAs, only a limited number is available for clinical application, particularly against epithelial malignancies. In this study we searched for novel TAAs using expression profiles of gastric cancer examined with cDNA microarray, and identified the SCRN1 gene as a candidate. SCRN1 was confirmed to be expressed in five out of seven gastric cancers with semiquantitative RT-PCR. With Northern blot analysis, it was detected abundantly in the testis and ovary, but it was barely detectable in 14 other normal human adult organs. Colony formation assay revealed that its augmented expression is associated with promoted cell growth. As these expression profiles and functional features of SCRN1 appeared to be compatible with the characteristics of the hypothesized ideal TAAs, we examined whether SCRN1 protein contains antigenic epitope peptides restricted to HLA-A*0201. We synthesized the candidate peptides derived from SCRN1, and tried to induce CTLs with each peptide. The CTL clones were successfully induced with a peptide SCRN1-196 (KMDAEHPEL), and they lyzed not only the peptide-pulsed targets but also the tumor cells expressing both SCRN1 and HLA-A*0201 endogenously. These results strongly suggest that SCRN1-196 is an epitope peptide restricted to HLA-A*0201. Furthermore, we synthesized an anchor-modified peptide SCRN1-9 V (KMDAEHPEV), in which leucine at position 9 was substituted for valine to increase the binding affinity to the HLA-A*0201 molecules. The CTL clones induced by SCRN1-9 V also recognized tumor cells expressing its natural SCRN1 protein endogenously. These results strongly suggest that SCRN1 is a novel TAA and these peptides, both native and modified, may be applicable for cancer vaccines to treat gastric cancer.

Indexed as

AnimalsAntigens, NeoplasmCell Line, TumorChlorocebus aethiopsCOS CellsEpitopesGene Expression ProfilingHLA-A2 AntigenHLA-A AntigensHumansImmunotherapyMiceNerve Tissue ProteinsNIH 3T3 CellsOligonucleotide Array Sequence AnalysisPeptide FragmentsAntigens, NeoplasmEpitopesHLA-A*02:01 antigenHLA-A2 AntigenHLA-A AntigensNerve Tissue ProteinsPeptide FragmentsSCRN1 protein, human

Identifiers

PMID16630140
PMCPMC11159625
OpenAlexW1985738617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.