Evidence map›Paper›PMID 16629640›Full record

ArticleThe Biochemical journal2006

Evidence for allosteric regulation of pH-sensitive System A (SNAT2) and System N (SNAT5) amino acid transporter activity involving a conserved histidine residue.

Fiona E Baird, Jorge J Pinilla-Tenas, William L J Ogilvie, Vadival Ganapathy, Harinder S Hundal, Peter M Taylor

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 47 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. pH-dependent regulation in SLC38A9.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. The SLC38 family of sodium-amino acid co-transporters.Pflugers Archiv : European journal of physiology · 2014
    Review
  18. Article
  19. Capturing cooperative interactions with the PSI-MI format.Database : the journal of biological databases and curation · 2013
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Fiona E BairdDivision of Molecular Physiology, School of Life Sciences, University of Dundee, Dundee DD1 5EH, UK.
Jorge J Pinilla-Tenas
William L J Ogilvie
Vadival Ganapathy
Harinder S Hundal
Peter M Taylor
University of Dundee · GBAugusta University · US

Funding

Biotechnology and Biological Sciences Research Council C19477
6 · The paper itself

Abstract

System A and N amino acid transporters are key effectors of movement of amino acids across the plasma membrane of mammalian cells. These Na+-dependent transporters of the SLC38 gene family are highly sensitive to changes in pH within the physiological range, with transport markedly depressed at pH 7.0. We have investigated the possible role of histidine residues in the transporter proteins in determining this pH-sensitivity. The histidine-modifying agent DEPC (diethyl pyrocarbonate) markedly reduces the pH-sensitivity of SNAT2 and SNAT5 transporters (representative isoforms of System A and N respectively, overexpressed in Xenopus oocytes) in a concentration-dependent manner but does not completely inactivate transport activity. These effects of DEPC were reversed by hydroxylamine and partially blocked in the presence of excess amino acid substrate. DEPC treatment also blocked a reduction in apparent affinity for Na+ (K0.5Na+) of the SNAT2 transporter at low external pH. Mutation of the highly conserved C-terminal histidine residue to alanine in either SNAT2 (H504A) or SNAT5 (H471A) produced a transport phenotype exhibiting reduced, DEPC-resistant pH-sensitivity with no change in K0.5Na+ at low external pH. We suggest that the pH-sensitivity of these structurally related transporters results at least partly from a common allosteric mechanism influencing Na+ binding, which involves an H+-modifier site associated with C-terminal histidine residues.

Indexed as

Allosteric SiteAmino Acid Transport System AAmino Acid Transport SystemsAmino Acid Transport Systems, NeutralAnimalsCell MembraneConserved SequenceFemaleHistidineHydrogen-Ion ConcentrationMolecular Sequence DataOocytesProtein TransportRatsXenopus laevisAmino Acid Transport System AAmino Acid Transport SystemsAmino Acid Transport Systems, NeutralHistidineSlc38a2 protein, ratSLC38A5 protein, human

Identifiers

PMID16629640
PMCPMC1513278
OpenAlexW2122705643

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.