Evidence map›Paper›PMID 16624903›Full record

ArticleGenetics2006

High-resolution radiation hybrid map of wheat chromosome 1D.

Venu Kalavacharla, Khwaja Hossain, Yong Gu, Oscar Riera-Lizarazu, M Isabel Vales, Suresh Bhamidimarri, Jose L Gonzalez-Hernandez, Shivcharan S Maan, Shahryar F Kianian

Abstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Physical mapping of the wheat genes in low-recombination regions: radiation hybrid mapping of the C-locus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  2. Article
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  5. Physical mapping of DNA markers linked to stem rust resistance gene Sr47 in durum wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
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  9. Physical mapping of chromosome 4J of Thinopyrum bessarabicum using gamma radiation-induced aberrations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
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  12. Radiation hybrid QTL mapping of Tdes2 involved in the first meiotic division of wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Venu KalavacharlaDepartment of Bioscience & Biotechnology, Drexel University, Philadelphia, Pennsylvania 19141, USA.
Khwaja Hossain
Yong Gu
Oscar Riera-Lizarazu
M Isabel Vales
Suresh Bhamidimarri
Jose L Gonzalez-Hernandez
Shivcharan S Maan
Shahryar F Kianian

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Physical mapping methods that do not rely on meiotic recombination are necessary for complex polyploid genomes such as wheat (Triticum aestivum L.). This need is due to the uneven distribution of recombination and significant variation in genetic to physical distance ratios. One method that has proven valuable in a number of nonplant and plant systems is radiation hybrid (RH) mapping. This work presents, for the first time, a high-resolution radiation hybrid map of wheat chromosome 1D (D genome) in a tetraploid durum wheat (T. turgidum L., AB genomes) background. An RH panel of 87 lines was used to map 378 molecular markers, which detected 2312 chromosome breaks. The total map distance ranged from approximately 3,341 cR(35,000) for five major linkage groups to 11,773 cR(35,000) for a comprehensive map. The mapping resolution was estimated to be approximately 199 kb/break and provided the starting point for BAC contig alignment. To date, this is the highest resolution that has been obtained by plant RH mapping and serves as a first step for the development of RH resources in wheat.

Indexed as

Chromosome BreakageChromosome MappingChromosomes, PlantExpressed Sequence TagsPolyploidyRadiation Hybrid MappingTriticum

Identifiers

PMID16624903
PMCPMC1526521

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.