Evidence map›Paper›PMID 16622469›Full record

ArticleBritish journal of cancer2006

ATM haplotypes and breast cancer risk in Jewish high-risk women.

M Koren, G Kimmel, E Ben-Asher, I Gal, M Z Papa, J S Beckmann, D Lancet, R Shamir, E Friedman

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Journal of gastric cancer · 2022
    Article
  2. Article
  3. Ataxia Telangiectasia-Mutated (Frontiers in public health · 2017
    Article
  4. Article
  5. Article
  6. Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2009
    Article
  7. DNA repair gene polymorphisms and risk of pancreatic cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2009
    Article
  8. Single nucleotide polymorphisms in DNA repair genes and prostate cancer risk.Methods in molecular biology (Clifton, N.J.) · 2009
    Review
  9. FGFR2 is a breast cancer susceptibility gene in Jewish and Arab Israeli populations.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2008
    Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

M Koren1Susanne Levy Gertner Oncogenetics Unit, The Danek Gertner Institute of Human Genetics, Tel-Hashomer, Israel.
G Kimmel
E Ben-Asher
I Gal
M Z Papa
J S Beckmann
D Lancet
R Shamir
E Friedman
Tel Aviv University · ILWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While genetic factors clearly play a role in conferring breast cancer risk, the contribution of ATM gene mutations to breast cancer is still unsettled. To shed light on this issue, ATM haplotypes were constructed using eight SNPs spanning the ATM gene region (142 kb) in ethnically diverse non-Ashkenazi Jewish controls (n=118) and high-risk (n=142) women. Of the 28 haplotypes noted, four were encountered in frequencies of 5% or more and accounted for 85% of all haplotypes. Subsequently, ATM haplotyping of high-risk, non-Ashkenazi Jews was performed on 66 women with breast cancer and 76 asymptomatic. One SNP (rs228589) was significantly more prevalent among breast cancer cases compared with controls (P=4 x 10(-9)), and one discriminative ATM haplotype was significantly more prevalent among breast cancer cases (33.3%) compared with controls (3.8%), (P< or =10(-10)). There was no significant difference in the SNP and haplotype distribution between asymptomatic high-risk and symptomatic women as a function of disease status. We conclude that a specific ATM SNP and a specific haplotype are associated with increased breast cancer risk in high-risk non-Ashkenazi Jews.

Indexed as

AdultAgedAtaxia TelangiectasiaAtaxia Telangiectasia Mutated ProteinsBreast NeoplasmsCase-Control StudiesCell Cycle ProteinsDNA-Binding ProteinsFemaleHaplotypesHumansIsraelJewsMiddle AgedPolymorphism, Single NucleotideProtein Serine-Threonine KinasesAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDNA-Binding ProteinsProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID16622469
PMCPMC2361267
OpenAlexW2136670381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.