Evidence map›Paper›PMID 16617081›Full record

ArticleBiophysical journal2006

Proton transfer in gramicidin water wires in phospholipid bilayers: attenuation by phosphoethanolamine.

Anatoly Chernyshev, Samuel Cukierman

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Quantum dynamics in continuum for proton transport II: Variational solvent-solute interface.International journal for numerical methods in biomedical engineering · 2012
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Anatoly ChernyshevDepartment of Physiology, Stritch School of Medicine, Loyola University Chicago, Maywood, Ilinois 60153, USA.
Samuel Cukierman
Loyola University Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transfer of protons in water wires was studied in native gramicidin A (gA), and in the SS- and RR-diastereoisomers of dioxolane-linked gA channels (SS and RR channels). These peptides were incorporated into membranes comprised of distinct combinations of phospholipid headgroups and acyl chains. Quantitative relationships between single channel conductances to H+ (g(H)) and [H+] were determined in distinct phospholipid membranes, and are in remarkable contrast with results previously obtained in monoglyceride membranes. In particular: 1), g(H)-[H+] relationships for the various gA channels in distinct phospholipid membranes are well fitted by single adsorption isotherms. A simple kinetic model assuming mono-occupancy of channels by protons fits said relationships. This does not occur with monoglyceride membranes. 2), Under nonsaturating [H+], g(H) is approximately 1 order of magnitude larger in phospholipid than in monoglyceride membranes. 3), Differences between rates of H+ transfer in various gA channels are still present but considerably attenuated in phospholipid relative to monoglyceride membranes. 4), Charged phospholipid headgroups affect g(H) via changes in [H+] at the membrane/solution interfaces. 5), Phosphoethanolamine groups caused a marked attenuation of g(H) relative to membranes with other phospholipid headgroups. This attenuation is voltage-dependent and tends to saturate H+ currents at voltages larger than 250 mV. This effect is likely to occur by limiting the access and exit of H+ in and out of the channel due to relatively strong oriented H-bonds between waters and phosphoethanolamine groups at channel interfaces. The differential effects of phospholipids on proton transfer could be reasoned by considering solvation effects of side chain residues of gramicidin channels by double acyl chains and by the presence of polar headgroups facilitating the entrance/exit of protons through the channel mouths.

Indexed as

ProtonsEthanolaminesGramicidinIon TransportLipid BilayersMonoglyceridesPeptidesPhospholipidsWaterEthanolaminesGramicidinLipid BilayersMonoglyceridesPeptidesPhospholipidsphosphorylethanolamineProtonsWater

Identifiers

PMID16617081
PMCPMC1483085
OpenAlexW2018223865

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.