Evidence map›Paper›PMID 16611901›Full record

ArticleJournal of virology2006

Expression profiles of endogenous retroviruses in Old World monkeys.

Anna Stengel, Christian Roos, Gerhard Hunsmann, Wolfgang Seifarth, Christine Leib-Mösch, Alex D Greenwood

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Expression of evolutionarily novel genes in tumors.Infectious agents and cancer · 2016
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 3 countries.

Anna StengelInstitute of Molecular Virology, GSF-National Research Center for Environment and Health, Room 2028, Building 35, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany.
Christian Roos
Gerhard Hunsmann
Wolfgang Seifarth
Christine Leib-Mösch
Alex D Greenwood
Heidelberg University · DEGerman Primate Center · DEInstitute of Virology of the Slovak Academy of Sciences · SKPrimate Conservation · USTechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human endogenous retroviruses (HERVs) are a major component of the human genome and an active part of the transcriptome. Some HERVs play vital biological roles, while others potentially contribute to diseases. Many HERVs are relatively new in the primate genome, having entered or expanded after the lineages leading to the platyrrhines (New World monkeys) and catarrhines (Old World monkeys and apes) separated. Most HERVs are active in at least some tissues, though tissue specificity is common for most elements. We analyzed multiple tissues from several Old World monkeys using retroviral pol-based DNA microarrays and quantitative PCR methods to determine their ERV expression profiles. The results demonstrate that while many ERVs are active in nonhuman primates, overall the tissue expression specificity is unique to each species. Most striking is that while the majority of HERVs analyzed in this study are expressed in human brain, almost none are expressed in Old World monkey brains or are only weakly expressed.

Indexed as

Gene Expression ProfilingGene Expression Regulation, ViralAnimalsCercopithecidaeEndogenous RetrovirusesFemaleMaleOligonucleotide Array Sequence AnalysisTranscription, Genetic

Identifiers

PMID16611901
PMCPMC1472034
OpenAlexW2114888785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.