Evidence map›Paper›PMID 16606689›Full record

ArticleThe Journal of general physiology2006

The polyamine binding site in inward rectifier K+ channels.

Harley T Kurata, Laurence J Marton, Colin G Nichols

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
  2. Review
  3. The role of polyamine metabolism in cellular function and physiology.American journal of physiology. Cell physiology · 2024
    Review
  4. Review
  5. Review
  6. Simulating PIPFrontiers in molecular biosciences · 2021
    Article
  7. Diamine Biosynthesis: Research Progress and Application Prospects.Applied and environmental microbiology · 2020
    Review
  8. Article
  9. Polyamines and potassium channels: A 25-year romance.The Journal of biological chemistry · 2018
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Apigenin Inhibits Human SW620 Cell Growth by Targeting Polyamine Catabolism.Evidence-based complementary and alternative medicine : eCAM · 2017
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Harley T KurataDepartment of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110, USA. cnichols@cellbio.wustl.edu
Laurence J Marton
Colin G Nichols
Washington University in St. Louis · US

Funding

Rectification &Block of Ion Channel CurrentsR01HL054171 · NHLBI · WASHINGTON UNIVERSITY · PI NICHOLS, COLIN G · 1995 to 2017
$4.5M
NHLBI NIH HHS HL54171NHLBI NIH HHS R01 HL054171
6 · The paper itself

Abstract

Strongly inwardly rectifying potassium channels exhibit potent and steeply voltage-dependent block by intracellular polyamines. To locate the polyamine binding site, we have examined the effects of polyamine blockade on the rate of MTSEA modification of cysteine residues strategically substituted in the pore of a strongly rectifying Kir channel (Kir6.2[N160D]). Spermine only protected cysteines substituted at a deep location in the pore, between the "rectification controller" residue (N160D in Kir6.2, D172 in Kir2.1) and the selectivity filter, against MTSEA modification. In contrast, blockade with a longer synthetic polyamine (CGC-11179) also protected cysteines substituted at sites closer to the cytoplasmic entrance of the channel. Modification of a cysteine at the entrance to the inner cavity (169C) was unaffected by either spermine or CGC-11179, and spermine was clearly "locked" into the inner cavity (i.e., exhibited a dramatically slower exit rate) following modification of this residue. These data provide physical constraints on the spermine binding site, demonstrating that spermine stably binds at a deep site beyond the "rectification controller" residue, near the extracellular entrance to the channel.

Indexed as

AnimalsBinding SitesBiogenic PolyaminesCell LineCysteineElectrophysiologyEthyl MethanesulfonateKcnj11 ChannelMembrane PotentialsModels, BiologicalPatch-Clamp TechniquesPolyaminesPotassium Channels, Inwardly RectifyingProtein BindingPutrescineSpermineBiogenic PolyaminesCGC 11179CysteineEthyl MethanesulfonateKcnj11 ChannelKir2.1 channelmethanethiosulfonate ethylammoniumPolyaminesPotassium Channels, Inwardly RectifyingPutrescineSpermine

Identifiers

PMID16606689
PMCPMC2151516
OpenAlexW2154525124

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.