Evidence map›Paper›PMID 16605268›Full record

ArticleBiochemistry2006

Peroxidase activity and structural transitions of cytochrome c bound to cardiolipin-containing membranes.

Natalia A Belikova, Yury A Vladimirov, Anatoly N Osipov, Alexandr A Kapralov, Vladimir A Tyurin, Maksim V Potapovich, Liana V Basova, Jim Peterson, Igor V Kurnikov, Valerian E Kagan

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 155 papers.

0numbers the graph read from it
0cells of the map it votes in
155citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

155 citing papers in PubMed, 394 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Impact of pulse duration on cardiac electroporation: nanosecond pulses enhance cardiomyocyte selectivity and promote a Raman-detected shift towards apoptotic cell death.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Cardiac Tyrosine 97 Phosphorylation of CytochromeInternational journal of molecular sciences · 2025
    Article
  16. Review
  17. Review
  18. The Increase in the Peroxidase Activity of the CytochromeInternational journal of molecular sciences · 2024
    Article
  19. Review
  20. Review

95 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Natalia A BelikovaCenter for Free Radical and Antioxidant Health and Department of Environmental and Occupational Health, University of Pittsburgh, 100 Technology Drive, Suite 350, Pittsburgh, Pennsylvania 15219-3130, USA.
Yury A Vladimirov
Anatoly N Osipov
Alexandr A Kapralov
Vladimir A Tyurin
Maksim V Potapovich
Liana V Basova
Jim Peterson
Igor V Kurnikov
Valerian E Kagan
Pirogov Russian National Research Medical University · RULomonosov Moscow State University · RU

Funding

Training and EducationU19AI068021 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GREENBERGER, JOEL S · 2005 to 2019
$44.4M
Pulmonary Phosphatidylserine Oxidation in ApoptosisR01HL070755 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAGAN, VALERIAN E · 2002 to 2011
$3.0M
Lung Oxidative Stress/Inflammation By Carbon NanotubesR01OH008282 · OH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAGAN, VALERIAN E · 2005 to 2014
$2.8M
MITOCHONDRIA AND PULMONARY ENDOTHELIAL CELL DEATHR01HL061411 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PETERSON, JAMES · 2000 to 2007
$1.9M
NHLBI NIH HHS HL61411NHLBI NIH HHS R01 HL061411NHLBI NIH HHS R01 HL070755NIAID NIH HHS U19 AI068021NIOSH CDC HHS OH 008282
6 · The paper itself

Abstract

During apoptosis, cytochrome c (cyt c) is released from intermembrane space of mitochondria into the cytosol where it triggers the caspase-dependent machinery. We discovered that cyt c plays another critical role in early apoptosis as a cardiolipin (CL)-specific oxygenase to produce CL hydroperoxides required for release of pro-apoptotic factors [Kagan, V. E., et al. (2005) Nat. Chem. Biol. 1, 223-232]. We quantitatively characterized the activation of peroxidase activity of cyt c by CL and hydrogen peroxide. At low ionic strength and high CL/cyt c ratios, peroxidase activity of the CL/cyt c complex was increased >50 times. This catalytic activity correlated with partial unfolding of cyt c monitored by Trp(59) fluorescence and absorbance at 695 nm (Fe-S(Met(80)) band). The peroxidase activity increase preceded the loss of protein tertiary structure. Monounsaturated tetraoleoyl-CL (TOCL) induced peroxidase activity and unfolding of cyt c more effectively than saturated tetramyristoyl-CL (TMCL). TOCL/cyt c complex was found more resistant to dissociation by high salt concentration. These findings suggest that electrostatic CL/cyt c interactions are central to the initiation of the peroxidase activity, while hydrophobic interactions are involved when cyt c's tertiary structure is lost. In the presence of CL, cyt c peroxidase activity is activated at lower H(2)O(2) concentrations than for isolated cyt c molecules. This suggests that redistribution of CL in the mitochondrial membranes combined with increased production of H(2)O(2) can switch on the peroxidase activity of cyt c and CL oxidation in mitochondria-a required step in execution of apoptosis.

Indexed as

Structure-Activity RelationshipAcridine OrangeAnimalsBinding, CompetitiveCardiolipinsCell MembraneCytochromes cElectrophoresisEnzyme ActivationEtoposideFluoresceinsHorsesHydrophobic and Hydrophilic InteractionsLipidsLiposomesOsmolar Concentration1,2-oleoylphosphatidylcholine2',7'-dichlorodihydrofluoresceinAcridine OrangeCardiolipinsCytochromes cEtoposideFluoresceinsLipidsLiposomesPeroxidasePhosphatidylcholinesTryptophan

Identifiers

PMID16605268
PMCPMC2527545
OpenAlexW2052401089

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.