Evidence map›Paper›PMID 16603500›Full record

ArticleBiophysical journal2006

Three-dimensional distribution of ryanodine receptor clusters in cardiac myocytes.

Ye Chen-Izu, Stacey L McCulle, Chris W Ward, Christian Soeller, Bryan M Allen, Cal Rabang, Mark B Cannell, C William Balke, Leighton T Izu

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
  2. Role of ryanodine receptor cooperativity in CaThe Journal of physiology · 2024
    Article
  3. Article
  4. Mechanisms of spontaneous CaThe Journal of physiology · 2023
    Article
  5. Avian cardiomyocyte architecture and what it reveals about the evolution of the vertebrate heart.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  6. Three-dimensional visualization of the cardiac ryanodine receptor clusters and the molecular-scale fraying of dyads.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  7. Review
  8. Article
  9. A viscoelastic Eshelby inclusion model and analysis of the Cell-in-Gel system.International journal of engineering science · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Coupling of SK channels, L-type CaScientific reports · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Ye Chen-IzuUniversity of Kentucky, College of Medicine, Lexington, Kentucky 40536-0509, USA. YeChen-Izu@uky.edu
Stacey L McCulle
Chris W Ward
Christian Soeller
Bryan M Allen
Cal Rabang
Mark B Cannell
C William Balke
Leighton T Izu
University of Kentucky · USUniversity of Auckland · NZRochester Institute of Technology · USUniversity of Maryland, Baltimore · USUniversity of Maryland, Baltimore County · US

Funding

Mechanisms of E-C Coupling in Atrial CellsR01HL071865 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI BALKE, C WILLIAM · 2003 to 2006
$1.5M
CA Permeable Na Channels &Cardiac Cell ExcitationR01HL068733 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI BALKE, C WILLIAM · 2003 to 2006
$1.5M
Calcium Waves in Atrial CellsK25HL068704 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI IZU, LEIGHTON T. · 2002 to 2005
$529k
MECHANISMS OF ALTERED CONTRACTILITY IN HEART FAILURER01HL050435 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI BALKE, C WILLIAM · 1994 to 2000
$200k
NHLBI NIH HHS 1K25HL68704NHLBI NIH HHS HL50435-05NHLBI NIH HHS K25 HL068704NHLBI NIH HHS R01 HL068733NHLBI NIH HHS R01 HL071865NHLBI NIH HHS R01HL071865NHLBI NIH HHS R01HL68733
6 · The paper itself

Abstract

The clustering of ryanodine receptors (RyR2) into functional Ca2+ release units is central to current models for cardiac excitation-contraction (E-C) coupling. Using immunolabeling and confocal microscopy, we have analyzed the distribution of RyR2 clusters in rat and ventricular atrial myocytes. The resolution of the three-dimensional structure was improved by a novel transverse sectioning method as well as digital deconvolution. In contrast to earlier reports, the mean RyR2 cluster transverse spacing was measured 1.05 microm in ventricular myocytes and estimated 0.97 microm in atrial myocytes. Intercalated RyR2 clusters were found interspersed between the Z-disks on the cell periphery but absent in the interior, forming double rows flanking the local Z-disks on the surface. The longitudinal spacing between the adjacent rows of RyR2 clusters on the Z-disks was measured to have a mean value of 1.87 microm in ventricular and 1.69 microm in atrial myocytes. The measured RyR2 cluster distribution is compatible with models of Ca2+ wave generation. The size of the typical RyR2 cluster was close to 250 nm, and this suggests that approximately 100 RyR2s might be present in a cluster. The importance of cluster size and three-dimensional spacing for current E-C coupling models is discussed.

Indexed as

Models, CardiovascularAnimalsCalciumCalcium SignalingCells, CulturedComputer SimulationHeart AtriaHeart VentriclesMyocytes, CardiacRatsRats, Sprague-DawleyRyanodine Receptor Calcium Release ChannelTissue DistributionCalciumRyanodine Receptor Calcium Release Channel

Identifiers

PMID16603500
PMCPMC1479079
OpenAlexW2090116945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.