Evidence map›Paper›PMID 16601681›Full record

ArticleThe EMBO journal2006

Antiviral effect of the mammalian translation initiation factor 2alpha kinase GCN2 against RNA viruses.

Juan J Berlanga, Iván Ventoso, Heather P Harding, Jing Deng, David Ron, Nahum Sonenberg, Luis Carrasco, César de Haro

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 198 citations in OpenAlex.

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  20. The amino acid sensor GCN2 controls red blood cell clearance and iron metabolism through regulation of liver macrophages.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Juan J BerlangaCentro de Biología Molecular Severo Ochoa, CSIC-UAM, Facultad de Ciencias, Cantoblanco, Universidad Autónoma de Madrid, Madrid, Spain.
Iván Ventoso
Heather P Harding
Jing Deng
David Ron
Nahum Sonenberg
Luis Carrasco
César de Haro
McGill University · CANew York University · USUniversidad Autónoma de Madrid · ESCentro de Biología Molecular Severo Ochoa · ES

Funding

THE CELLULAR RESPONSE TO NON-MUTAGENIC CARCINOGENSR01ES008681 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FISHMAN, GLENN I · 1996 to 2010
$4.4M
Metabolic Regulation in the Acute PhaseR37DK047119 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RON, DAVID · 2003 to 2009
$3.0M
METABOLIC REGULATION IN THE ACUTE PHASER01DK047119 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RYOO, HYUNG D · 1999 to 2010
$1.5M
METABOLIC REGULATION IN THE ACUTE-PHASE RESPONSER29DK047119 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RON, DAVID · 1993 to 1997
–
NIDDK NIH HHS DK47119NIDDK NIH HHS R01 DK047119NIDDK NIH HHS R37 DK047119NIEHS NIH HHS ES08681NIEHS NIH HHS R01 ES008681
6 · The paper itself

Abstract

In mammals, four different protein kinases, heme-regulated inhibitor, double-stranded RNA-dependent protein kinase (PKR), general control non-derepressible-2 (GCN2) and PKR-like endoplasmic reticulum kinase, regulate protein synthesis in response to environmental stresses by phosphorylating the alpha-subunit of the initiation factor 2 (eIF2alpha). We now report that mammalian GCN2 is specifically activated in vitro upon binding of two nonadjacent regions of the Sindbis virus (SV) genomic RNA to its histidyl-tRNA synthetase-related domain. Moreover, endogenous GCN2 is activated in cells upon SV infection. Strikingly, fibroblasts derived from GCN2-/- mice possess an increased permissiveness to SV or vesicular stomatitis virus infection. We further show that mice lacking GCN2 are extremely susceptible to intranasal SV infection, demonstrating high virus titers in the brain compared to similarly infected control animals. The overexpression of wild-type GCN2, but not the catalytically inactive GCN2-K618R variant, in NIH 3T3 cells impaired the replication of a number of RNA viruses. We determined that GCN2 inhibits SV replication by blocking early viral translation of genomic SV RNA. These findings point to a hitherto unrecognized role of GCN2 as an early mediator in the cellular response to RNA viruses.

Indexed as

Genome, ViralAlphavirus InfectionsAnimalsBrainCell LineEnzyme ActivationHumansMiceMutationProtein BiosynthesisProtein KinasesProtein Serine-Threonine KinasesRNA, ViralSindbis VirusVesicular stomatitis Indiana virusVirus ReplicationEif2ak4 protein, mouseProtein KinasesProtein Serine-Threonine KinasesRNA, Viral

Identifiers

PMID16601681
PMCPMC1440839
OpenAlexW2119003997

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.