Evidence map›Paper›PMID 1660135›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1991

DNA binding by the archaeal histone HMf results in positive supercoiling.

D R Musgrave, K M Sandman, J N Reeve

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1991. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 111 citations in OpenAlex.

  1. Review
  2. Article
  3. The regulation of DNA supercoiling across evolution.Protein science : a publication of the Protein Society · 2021
    Review
  4. Article
  5. Archaea: The Final Frontier of Chromatin.Journal of molecular biology · 2021
    Review
  6. Review
  7. Review
  8. Centromere identity: a challenge to be faced.Molecular genetics and genomics : MGG · 2010
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Nanoarchaeal origin of histone H3?Journal of bacteriology · 2009
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Histones in crenarchaea.Journal of bacteriology · 2005
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

D R MusgraveDepartment of Microbiology, Ohio State University, Columbus 43210.
K M Sandman
J N Reeve
The Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HMf, a histone from the hyperthermophilic archaeon Methanothermus fervidus binds double-stranded DNA molecules in vitro, forming compact structures that visibly resemble eukaryal nucleosomes. We show here that HMf binding increases the helical periodicity of DNA molecules to approximately 11 base pairs (bp) per turn and that DNA molecules in these nucleosome-like structures are constrained in positive toroidal supercoils. Based on the mass of HMf needed to cause a change in linking number (delta Lk), the maximum delta Lk introduced into circular DNA molecules of known sizes, and electron microscopy, we estimate that each HMf-DNA structure contains between 90 and 150 bp of DNA wrapped in 1.5 positive toroidal supercoils around a core of four HMf molecules. A model and pathway for the formation of these structures in vitro are presented and the possible role of positive toroidal wrapping of the M. fervidus genome in vivo is discussed.

Indexed as

Archaeal ProteinsPlasmidsBase SequenceBinding SitesDNA, BacterialDNA-Binding ProteinsDNA, CircularEscherichia coliEuryarchaeotaFree RadicalsHistonesHydroxidesHydroxyl RadicalModels, MolecularMolecular Sequence DataNucleic Acid ConformationArchaeal ProteinsDNA, BacterialDNA-Binding ProteinsDNA, CircularFree RadicalsHistonesHMf protein, ArchaealHydroxidesHydroxyl Radical

Identifiers

PMID1660135
PMCPMC52935
OpenAlexW1989346952

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.