Evidence map›Paper›PMID 16598069›Full record

ArticleNeuro-oncology2006

Variation in genes relevant to aromatic hydrocarbon metabolism and the risk of adult brain tumors.

Anneclaire J De Roos, Nathaniel Rothman, Merideth Brown, Douglas A Bell, Gary S Pittman, William R Shapiro, Robert G Selker, Howard A Fine, Peter M Black, Peter D Inskip

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Neuro-oncology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 5 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 5 syntheses or guidelines pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Cigarette smoking and risk of meningioma: the effect of gender.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2012
    Pooled it
  4. Pooled it
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  6. Associations between polymorphisms in DNA repair genes and glioblastoma.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2009
    Trial
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  18. Molecular epidemiology of primary brain tumors.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Anneclaire J De RoosFred Hutchinson Cancer Research Center and University of Washington Department of Epidemiology, Seattle, WA 98109, USA. deroos@u.washington.edu
Nathaniel Rothman
Merideth Brown
Douglas A Bell
Gary S Pittman
William R Shapiro
Robert G Selker
Howard A Fine
Peter M Black
Peter D Inskip
Fred Hutch Cancer Center · USNational Cancer Institute · USDivision of Cancer Epidemiology and GeneticsNational Institute of Environmental Health Sciences · USUniversity of Washington · USWestern Pennsylvania Hospital · US

Funding

Genetic Susceptibility To Carcinogens and ToxicantsZIAES046008 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BELL, DOUGLAS · 2009 to 2021
$7.8M
Treatment of Central Nervous System Tumors in Children/AZ01SC010100 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI FINE, HOWARD A · 2000 to 2008
$4.5M
The Glioma Molecular Diagnostic Initiative: Characterizing Brain Tumor DataZIASC010100 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI FINE, HOWARD · 2009 to 2012
$3.2M
STUDIES OF NON-IONIZING RADIATION-RELATED CANCERZ01CP010135 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI INSKIP, PETER D · 1997 to 2008
$2.2M
INHERITED CANCER SUSCEPTIBILITY AND RELATION TO GENETIC DAMAGEZ01ES046008 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BELL, DOUGLAS · 1991 to 2008
$682k
Intramural NIH HHS
6 · The paper itself

Abstract

Genes involved in phase I and phase II regulation of aromatic hydrocarbon-induced effects exhibit sequence variability that may mediate the risk of adult brain tumors. We evaluated associations between gene variants in CYP1A1, CYP1B1, GSTM3, EPHX1, and NQO1 and adult brain tumor incidence. Cases were patients with glioma (n = 489), meningioma (n = 197), or acoustic neuroma (n = 96) diagnosed from 1994 to 1998 at three U.S. hospitals. Controls were 799 patients admitted to the same hospitals for nonmalignant conditions. DNA was extracted from blood samples collected from 1277 subjects, and genotyping was conducted for CYP1A1 I462V, CYP1B1 V432L, EPHX1 Y113H, GSTM3 *A/*B (intron 6 deletion), and NQO1 P187S. The CYP1B1 V432L homozygous variant was associated with decreased risk of meningioma (odds ratio [OR] = 0.6; 95% CI, 0.3-1.0) but not the other tumor types. The GSTM3 *B/*B genotype was associated with increased risk of glioma (OR = 2.3; 95% CI, 1.0-5.2) and meningioma (OR = 3.6; 95% CI, 1.3-9.8). Increased risks associated with GSTM3 *B/*B were observed in younger subjects (age < 50) and older subjects (age > or = 50), in men and women, and within each study site. The magnitude of association for GSTM3 with glioma and meningioma was greater among ever-smokers than among those who had never smoked. None of the other genotypes showed consistent associations with any tumor type. The association with the GSTM3 *B allele, while intriguing, requires replication, and additional research is needed to clarify the function of the GSTM3 alleles studied here.

Indexed as

Genetic Predisposition to DiseaseAdultAgedAryl Hydrocarbon HydroxylasesBrain NeoplasmsCytochrome P-450 CYP1A1Cytochrome P-450 CYP1B1Epoxide HydrolasesFemaleGenotypeGliomaHumansHydrocarbons, AromaticMaleMeningiomaMiddle AgedAryl Hydrocarbon HydroxylasesCYP1B1 protein, humanCytochrome P-450 CYP1A1Cytochrome P-450 CYP1B1Epoxide HydrolasesHydrocarbons, AromaticNAD(P)H Dehydrogenase (Quinone)NQO1 protein, human

Identifiers

PMID16598069
PMCPMC1871937
OpenAlexW2133366214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.