Evidence map›Paper›PMID 16597736›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2006

The GxGD motif of presenilin contributes to catalytic function and substrate identification of gamma-secretase.

Aya Yamasaki, Stefan Eimer, Masayasu Okochi, Agata Smialowska, Christoph Kaether, Ralf Baumeister, Christian Haass, Harald Steiner

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 82 citations in OpenAlex.

  1. Review
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  10. Biomolecules · 2020
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  13. Aβ oligomers trigger and accelerate Aβ seeding.Brain pathology (Zurich, Switzerland) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Aya YamasakiLaboratory for Alzheimer's and Parkinson's Disease Research, Department of Biochemistry, Adolf Butenandt Institute, Ludwig Maximilians University, 80336 Munich, Germany.
Stefan Eimer
Masayasu Okochi
Agata Smialowska
Christoph Kaether
Ralf Baumeister
Christian Haass
Harald Steiner
University of Freiburg · DELudwig-Maximilians-Universität München · DEOsaka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gamma-secretase is a multisubunit aspartyl protease complex that catalyzes intramembrane cleavage of beta-amyloid precursor protein (APP), a substrate key to Alzheimer's disease pathogenesis, and of Notch, a substrate crucial for cell differentiation. How gamma-secretase recognizes and selects substrates is currently barely understood. Recent data suggest that its subunit nicastrin serves as an initial substrate receptor, which might subsequently forward substrates to the active site domain located in its catalytic subunit presenilin (PS), where an additional substrate binding site has been proposed. We now used an active site domain swapping approach of PS1 with its most distant homolog, spermatogenesis defective (SPE-4), to identify sequence determinants in this region. Strikingly, when the active site domain of PS1 was exchanged with that of SPE-4, the chimeric protein, PS1/SPE-4(6/7), supported APP but not Notch processing. In addition, PS1/SPE-4(6/7) was strongly impaired in Caenorhabditis elegans Notch signaling in vivo. Mapping experiments identified a single amino acid at position x of the GxGD motif, which contains one of the two active site aspartates, to be responsible for the observed defect in Notch processing and signaling. Our data thus implicate a role of the GxGD motif in catalytic function and substrate identification of gamma-secretase.

Indexed as

Amino Acid MotifsAmino Acid SubstitutionAmyloid Precursor Protein SecretasesAnimalsAspartic Acid EndopeptidasesBinding SitesCatalysisCells, CulturedEndopeptidasesEnzyme ActivationFibroblastsMembrane ProteinsMiceMutagenesis, Site-DirectedPresenilin-1Protein BindingAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesBace1 protein, mouseEndopeptidasesMembrane ProteinsPresenilin-1

Identifiers

PMID16597736
PMCPMC6674133
OpenAlexW1976230573

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.