ArticleNucleic acids research2006
NMR structure of the Aquifex aeolicus tmRNA pseudoknot PK1: new insights into the recoding event of the ribosomal trans-translation.
Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 32 citations in OpenAlex.
- Assessing RNA atomistic force fields via energy landscape explorations in implicit solvent.Biophysical reviews · 2024Review
- RNA folding pathways from all-atom simulations with a variationally improved history-dependent bias.Biophysical journal · 2023Article
- Computer-aided comprehensive explorations of RNA structural polymorphism through complementary simulation methods.QRB discovery · 2022Review
- What Can Human-Guided Simulations Bring to RNA Folding?Biophysical journal · 2017Article
- A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.Nature · 2014Article
- In vivo tmRNA protection by SmpB and pre-ribosome binding conformation in solution.RNA (New York, N.Y.) · 2014Article
- Unique motifs and hydrophobic interactions shape the binding of modified DNA ligands to protein targets.Proceedings of the National Academy of Sciences of the United States of America · 2012Article
- RNA pseudoknots: folding and finding.F1000 biology reports · 2010Article
- Fluorescence competition assay measurements of free energy changes for RNA pseudoknots.Biochemistry · 2010Article
- Frameshifting RNA pseudoknots: structure and mechanism.Virus research · 2009Review
- Quality control of bacterial mRNA decoding and decay.Biochimica et biophysica acta · 2008Article
- Viral RNA pseudoknots: versatile motifs in gene expression and replication.Nature reviews. Microbiology · 2007Review
- NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA-modified aptamer.Nucleic acids research · 2007Article
- Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome.Proceedings of the National Academy of Sciences of the United States of America · 2006Article
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The transfer-messenger RNA (tmRNA) pseudoknot PK1 is essential for bacterial trans-translation, a ribosomal rescue mechanism. We report the solution structure of PK1 from Aquifex aeolicus, which despite an unprecedented small number of nucleotides and thus an unprecented compact size, displays a very high thermal stability. Several unusual structural features account for these properties and indicate that PK1 belongs to the class of ribosomal frameshift pseudoknots. This suggests a similarity between the mechanism of programmed ribosomal frameshifting and trans-translation.
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