Evidence map›Paper›PMID 16585768›Full record

ArticleJournal of bacteriology2006

The Erwinia chrysanthemi 3937 PhoQ sensor kinase regulates several virulence determinants.

Balakrishnan Venkatesh, Lavanya Babujee, Hui Liu, Pete Hedley, Takashi Fujikawa, Paul Birch, Ian Toth, Shinji Tsuyumu

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. How the PhoP/PhoQ System Controls Virulence and MgMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  3. Exploration of the Quorum-Quenching Mechanism inFrontiers in microbiology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Balakrishnan VenkateshLaboratory of Plant Pathology, Faculty of Agriculture, Shizuoka University, 836 Ohya, Suruga-Ku, Shizuoka 422-8529, Japan.
Lavanya Babujee
Hui Liu
Pete Hedley
Takashi Fujikawa
Paul Birch
Ian Toth
Shinji Tsuyumu
Shizuoka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The PhoPQ two-component system regulates virulence factors in Erwinia chrysanthemi, a pectinolytic enterobacterium that causes soft rot in several plant species. We characterized the effect of a mutation in phoQ, the gene encoding the sensor kinase PhoQ of the PhoPQ two-component regulatory system, on the global transcriptional profile of E. chrysanthemi using cDNA microarrays and further confirmed our results by quantitative reverse transcription-PCR analysis. Our results indicate that a mutation in phoQ affects transcription of at least 40 genes, even in the absence of inducing conditions. Enhanced expression of several genes involved in iron metabolism was observed in the mutant, including that of the acs operon that is involved in achromobactin biosynthesis and transport. This siderophore is required for full virulence of E. chrysanthemi, and its expression is governed by the global repressor protein Fur. Changes in gene expression were also observed for membrane transporters, stress-related genes, toxins, and transcriptional regulators. Our results indicate that the PhoPQ system governs the expression of several additional virulence factors and may also be involved in interactions with other regulatory systems.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsBacterial ToxinsDickeya chrysanthemiGene DeletionGene Expression ProfilingGenes, BacterialGenes, RegulatorMembrane Transport ProteinsMutagenesis, InsertionalOligonucleotide Array Sequence AnalysisOperonReverse Transcriptase Polymerase Chain ReactionSiderophoresVirulence FactorsBacterial ProteinsBacterial ToxinsMembrane Transport ProteinsPhoQ protein, BacteriaSiderophoresVirulence Factors

Identifiers

PMID16585768
PMCPMC1447017
OpenAlexW2102282021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.