Evidence map›Paper›PMID 16582449›Full record

ArticleGenetics2006

Histone H1 of Saccharomyces cerevisiae inhibits transcriptional silencing.

Marie Veron, Yanfei Zou, Qun Yu, Xin Bi, Abdelkader Selmi, Eric Gilson, Pierre-Antoine Defossez

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Yeast HMO1: Linker Histone Reinvented.Microbiology and molecular biology reviews : MMBR · 2017
    Review
  4. Article
  5. Article
  6. Article
  7. Profiling of linker histone variants in ovarian cancer.Frontiers in bioscience (Landmark edition) · 2012
    Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Marie VeronSection Recherche, Institut Curie, CNRS UMR218, Paris, France.
Yanfei Zou
Qun Yu
Xin Bi
Abdelkader Selmi
Eric Gilson
Pierre-Antoine Defossez
University of Rochester · USCentre National de la Recherche Scientifique · FRÉcole Normale Supérieure de Lyon · FRInstitut Curie · FR

Funding

Transcriptionally silent chromatin domains in yeastR01GM062484 · NIGMS · UNIVERSITY OF ROCHESTER · PI BI, XIN · 2001 to 2009
$2.4M
NIGMS NIH HHS R01 GM062484NIGMS NIH HHS R01 GM-62484
6 · The paper itself

Abstract

Eukaryotic genomes contain euchromatic regions, which are transcriptionally active, and heterochromatic regions, which are repressed. These domains are separated by "barrier elements": DNA sequences that protect euchromatic regions from encroachment by neighboring heterochromatin. To identify proteins that play a role in the function of barrier elements we have carried out a screen in S. cerevisiae. We recovered the gene HHO1, which encodes the yeast ortholog of histone H1, as a high-copy modifier of barrier activity. Histone H1 is a linker histone that binds the outside of nucleosomes and modifies chromatin dynamics. Here we show that Hho1p reinforces the action of several types of barrier elements, and also inhibits silencing on its own.

Indexed as

Genes, FungalGene SilencingAmino Acid SequenceHistonesMolecular Sequence DataNucleosomesProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeTranscription FactorsTranscription, GeneticGAL4 (1-147) protein, S cerevisiaeHHO1 protein, S cerevisiaeHistonesHtz1 protein, S cerevisiaeNucleosomesSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeTranscription Factors

Identifiers

PMID16582449
PMCPMC1526531
OpenAlexW2140223357

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.