Evidence map›Paper›PMID 16571642›Full record

ArticleHuman reproduction (Oxford, England)2006

The human cumulus--oocyte complex gene-expression profile.

Said Assou, Tal Anahory, Véronique Pantesco, Tanguy Le Carrour, Franck Pellestor, Bernard Klein, Lionel Reyftmann, Hervé Dechaud, John De Vos, Samir Hamamah

Open access · greenAbstract read
In one paragraph

Article in Human reproduction (Oxford, England), 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed, 2 pooled it
21.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 2 syntheses or guidelines pooled it, 288 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Trial
  5. Trial
  6. Trial
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Novel PATL2 variants cause female infertility with oocyte maturation defect.Journal of assisted reproduction and genetics · 2024
    Article
  17. Review
  18. Article
  19. Article
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Said AssouCHU Montpellier, Institut de Recherche en Biothérapie, Hôpital Saint-Eloi, and INSERM U 475, Université Montpellier, UFR de Médecine, France.
Tal Anahory
Véronique Pantesco
Tanguy Le Carrour
Franck Pellestor
Bernard Klein
Lionel Reyftmann
Hervé Dechaud
John De Vos
Samir Hamamah
Hôpital Arnaud de Villeneuve · FRUniversité de Montpellier · FRHôpital Saint Eloi · FRInserm · FRInstitut de Génétique Humaine · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe understanding of the mechanisms regulating human oocyte maturation is still rudimentary. We have identified transcripts differentially expressed between immature and mature oocytes and cumulus cells.

methodsUsing oligonucleotide microarrays, genome-wide gene expression was studied in pooled immature and mature oocytes or cumulus cells from patients who underwent IVF.

resultsIn addition to known genes, such as DAZL, BMP15 or GDF9, oocytes up-regulated 1514 genes. We show that PTTG3 and AURKC are respectively the securin and the Aurora kinase preferentially expressed during oocyte meiosis. Strikingly, oocytes overexpressed previously unreported growth factors such as TNFSF13/APRIL, FGF9, FGF14 and IL4 and transcription factors including OTX2, SOX15 and SOX30. Conversely, cumulus cells, in addition to known genes such as LHCGR or BMPR2, overexpressed cell-to-cell signalling genes including TNFSF11/RANKL, numerous complement components, semaphorins (SEMA3A, SEMA6A and SEMA6D) and CD genes such as CD200. We also identified 52 genes progressively increasing during oocyte maturation, including CDC25A and SOCS7.

conclusionThe identification of genes that were up- and down-regulated during oocyte maturation greatly improves our understanding of oocyte biology and will provide new markers that signal viable and competent oocytes. Furthermore, genes found expressed in cumulus cells are potential markers of granulosa cell tumours.

Indexed as

Gene Expression Regulation, DevelopmentalAurora Kinase CAurora KinasesCarrier ProteinsDown-RegulationFemaleFertilization in VitroGranulosa CellsGrowth SubstancesHumansMembrane GlycoproteinsMembrane ProteinsNeoplasm ProteinsOligonucleotide Array Sequence AnalysisOocytesProtein Serine-Threonine KinasesAURKC protein, humanAurora Kinase CAurora KinasesCarrier ProteinsGrowth SubstancesMembrane GlycoproteinsMembrane ProteinsNeoplasm Proteinspituitary tumor-transforming protein 1, humanpituitary tumor-transforming protein 2, humanProtein Serine-Threonine KinasesRANK LigandReceptor Activator of Nuclear Factor-kappa BSecurinSemaphorinsTNFRSF11A protein, humanTNFSF11 protein, humanTNFSF13 protein, humanTranscription FactorsTumor Necrosis Factor-alphaTumor Necrosis Factor Ligand Superfamily Member 13

Identifiers

PMID16571642
PMCPMC2377388
OpenAlexW2116678605

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.