Evidence map›Paper›PMID 16569515›Full record

ArticleDNA repair2006

Esc4/Rtt107 and the control of recombination during replication.

Jodie K Chin, Vladimir I Bashkirov, Wolf-Dietrich Heyer, Floyd E Romesberg

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 50 citations in OpenAlex.

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  5. TOPBP1The Journal of cell biology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jodie K ChinDepartment of Chemistry, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, CA 92037, USA.
Vladimir I Bashkirov
Wolf-Dietrich Heyer
Floyd E Romesberg
Scripps Research Institute · USUniversity of California, Davis · US

Funding

Regulation of Recombinational DNA RepairR01CA092276 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI HEYER, WOLF-DIETRICH · 2001 to 2020
$5.2M
Pathways Controlling Genome Stability and MutationR01GM068569 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ROMESBERG, FLOYD E. · 2004 to 2007
$1.4M
NCI NIH HHS R01 CA092276NCI NIH HHS R01 CA92276NIGMS NIH HHS R01 GM068569
6 · The paper itself

Abstract

When replication forks stall during DNA synthesis, cells respond by assembling multi-protein complexes to control the various pathways that stabilize the replication machinery, repair the replication fork, and facilitate the reinitiation of processive DNA synthesis. Increasing evidence suggests that cells have evolved scaffolding proteins to orchestrate and control the assembly of these repair complexes, typified in mammalian cells by several BRCT-motif containing proteins, such as Brca1, Xrcc1, and 53BP1. In Saccharomyces cerevisiae, Esc4 contains six such BRCT domains and is required for the most efficient response to a variety of agents that damage DNA. We show that Esc4 interacts with several proteins involved in the repair and processing of stalled or collapsed replication forks, including the recombination protein Rad55. However, the function of Esc4 does not appear to be restricted to a Rad55-dependent process, as we observed an increase in sensitivity to the DNA alkylating agent methane methylsulfonate (MMS) in a esc4Deltarad55Delta mutant, as well as in double mutants of esc4Delta and other recombination genes, compared to the corresponding single mutants. In addition, we show that Esc4 forms multiple nuclear foci in response to treatment with MMS. Similar behavior is also observed in the absence of damage when either of the S-phase checkpoint proteins, Tof1 or Mrc1, is deleted. Thus, we propose that Esc4 associates with ssDNA of stalled forks and acts as a scaffolding protein to recruit and/or modulate the function of other proteins required to reinitiate DNA synthesis.

Indexed as

DNA ReplicationRecombination, GeneticCell Cycle ProteinsCheckpoint Kinase 2DNA-Binding ProteinsDNA, FungalDNA RepairDNA, Single-StrandedIntracellular Signaling Peptides and ProteinsModels, BiologicalNuclear ProteinsPhosphorylationProtein Serine-Threonine KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTwo-Hybrid System TechniquesCell Cycle ProteinsCheckpoint Kinase 2DNA-Binding ProteinsDNA, FungalDNA, Single-StrandedIntracellular Signaling Peptides and ProteinsMEC1 protein, S cerevisiaeNuclear ProteinsProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeRAD55 protein, S cerevisiaeRTT107 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID16569515
PMCPMC2881479
OpenAlexW206267433

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.