Evidence map›Paper›PMID 16567465›Full record

ArticleThe Journal of general physiology2006

Roles of K149, G352, and H401 in the channel functions of ClC-0: testing the predictions from theoretical calculations.

Xiao-Dong Zhang, Yong Li, Wei-Ping Yu, Tsung-Yu Chen

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Insights into CLC-0's Slow-Gating from Intracellular Proton Inhibition.International journal of molecular sciences · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review. Proton-coupled gating in chloride channels.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2009
    Review
  8. Blocking pore-open mutants of CLC-0 by amphiphilic blockers.The Journal of general physiology · 2009
    Article
  9. Article
  10. Intracellular proton regulation of ClC-0.The Journal of general physiology · 2008
    Article
  11. The mechanism of fast-gate opening in ClC-0.The Journal of general physiology · 2007
    Article
  12. Article
  13. Cytoplasmic ATP inhibition of CLC-1 is enhanced by low pH.The Journal of general physiology · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xiao-Dong ZhangCenter for Neuroscience and Department of Neurology, University of California, Davis, 95616, USA.
Yong Li
Wei-Ping Yu
Tsung-Yu Chen
University of California, Davis · US

Funding

Molecular Physiology of CLC Chloride ChannelsR01GM065447 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI CHEN, TSUNG-YU · 2003 to 2018
$3.9M
Gating Mechanisms of CLC Chloride ChannelsR56GM065447 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, TSUNG-YU · 2008 to 2008
$375k
NIGMS NIH HHS GM65447NIGMS NIH HHS R01 GM065447NIGMS NIH HHS R56 GM065447
6 · The paper itself

Abstract

The ClC family of Cl(-) channels and transporters comprises membrane proteins ubiquitously present in species ranging from prokaryotes to mammals. The recently solved structures of the bacterial ClC proteins have provided a good model to guide the functional experiments for the eukaryotic Cl(-) channels. Theoretical calculations based on the bacterial ClC structures have identified several residues critical for the Cl(-) binding energy in the Cl(-) transport pathway. It was speculated that the corresponding residues in eukaryotic Cl(-) channels might play similar roles for the channel functions. In this study, we made a series of mutations in three such residues in eukaryotic ClC Cl(-) channels (K149, G352, and H401 in ClC-0) and studied the functional consequences on the channel properties. A cysteine modification approach was also employed to evaluate the electrostatic effects of the charge placed at these three positions. The experimental results revealed that among the three residues tested, K149 plays the most important role in controlling both the gating and the permeation functions of ClC-0. On the other hand, mutations of H401 alter the channel conductance but not the gating properties, while mutations of G352 result in very little functional consequence. The mutation of K149 into a neutral residue leucine (K149L) shifts the activation curve and leads to flickery channel openings. The anion permeability ratios derived from bi-ionic experiments are also significantly altered in that the selectivity of Cl(-) over other anions is decreased. Furthermore, removing the positive charge at this position reduces and increases, respectively, the accessibility of the negatively and positively charged methane thiosulfonate reagents to the pore. The control of the accessibility to charged MTS reagents and the regulation of the anion permeation support the idea that K149 exerts an electrostatic effect on the channel function, confirming the prediction from computational studies.

Indexed as

Amino Acid SubstitutionAnimalsCell Membrane PermeabilityChloride ChannelsElectric ConductivityHumansIon Channel GatingMembrane PotentialsModels, MolecularModels, TheoreticalOocytesPoint MutationProtein ConformationStructure-Activity RelationshipXenopus laevisChloride ChannelsCLC-0 chloride channel protein, Torpedo californica

Identifiers

PMID16567465
PMCPMC2151512
OpenAlexW1972921497

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.