Evidence map›Paper›PMID 16547104›Full record

ArticleGenetics2006

Identification of novel mutations in ACT1 and SLA2 that suppress the actin-cable-overproducing phenotype caused by overexpression of a dominant active form of Bni1p in Saccharomyces cerevisiae.

Shiro Yoshiuchi, Takaharu Yamamoto, Hiroshi Sakane, Jun Kadota, Junko Mochida, Masahiro Asaka, Kazuma Tanaka

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functions of actin in endocytosis.Cellular and molecular life sciences : CMLS · 2009
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Shiro YoshiuchiDivision of Molecular Interaction, Institute of Genetic Medicine, Hokkaido University Graduate School of Medicine, Sapporo 060-0815, Japan.
Takaharu Yamamoto
Hiroshi Sakane
Jun Kadota
Junko Mochida
Masahiro Asaka
Kazuma Tanaka
Hokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A formin Bni1p nucleates actin to assemble actin cables, which guide the polarized transport of secretory vesicles in budding yeast. We identified mutations that suppressed both the lethality and the excessive actin cable formation caused by overexpression of a truncated Bni1p (BNI1DeltaN). Two recessive mutations, act1-301 in the actin gene and sla2-82 in a gene involved in cortical actin patch assembly, were identified. The isolation of sla2-82 was unexpected, because cortical actin patches are required for the internalization step of endocytosis. Both act1-301 and sla2-82 exhibited synthetic growth defects with bni1Delta. act1-301, which resulted in an E117K substitution, interacted genetically with mutations in profilin (PFY1) and BUD6, suggesting that Act1-301p was not fully functional in formin-mediated polymerization. sla2-82 also interacted genetically with genes involved in actin cable assembly. Some experiments, however, suggested that the effects of sla2-82 were caused by depletion of actin monomers, because the temperature-sensitive growth phenotype of the bni1Delta sla2-82 mutant was suppressed by increased expression of ACT1. The isolation of suppressors of the BNI1DeltaN phenotype may provide a useful system for identification of actin amino-acid residues that are important for formin-mediated actin polymerization and mutations that affect the availability of actin monomers.

Indexed as

Genes, FungalActinsAmino Acid SubstitutionCarrier ProteinsCell Cycle ProteinsCytoskeletal ProteinsGene ExpressionGenes, DominantMicrofilament ProteinsMutationPhenotypeProfilinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTemperatureAct1 protein, S cerevisiaeActinsBni1 protein, S cerevisiaeBUD6 protein, S cerevisiaeCarrier ProteinsCDC3 protein, S cerevisiaeCell Cycle ProteinsCytoskeletal ProteinsMicrofilament ProteinsProfilinsSaccharomyces cerevisiae ProteinsSLA2 protein, S cerevisiae

Identifiers

PMID16547104
PMCPMC1526543
OpenAlexW2135535771

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.