Evidence map›Paper›PMID 16547024›Full record

ArticleJournal of bacteriology2006

Nucleotide-dependent dimerization of the C-terminal domain of the ABC transporter CvaB in colicin V secretion.

Xiangxue Guo, Robert W Harrison, Phang C Tai

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Colicin biology.Microbiology and molecular biology reviews : MMBR · 2007
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xiangxue GuoDepartment of Biology, Georgia State University, 24 Peachtree Center Avenue, 402 Kell Hall, Atlanta, GA 30303, USA.
Robert W Harrison
Phang C Tai
Georgia State University · US

Funding

PROTEIN TRANSLOCATION &EXPORT IN GRAM-NEGATIVE BACTERIAR01GM034766 · NIGMS · GEORGIA STATE UNIVERSITY · PI TAI, PHANG C. · 1985 to 2005
$2.5M
Georgia State University Biomedical Computing CenterP20GM065762 · NIGMS · GEORGIA STATE UNIVERSITY · PI HARRISON, ROBERT WILSON · 2003 to 2005
$1.2M
NIGMS NIH HHS GM34766NIGMS NIH HHS GM65762NIGMS NIH HHS P20 GM065762NIGMS NIH HHS R01 GM034766
6 · The paper itself

Abstract

The cytoplasmic membrane proteins CvaB and CvaA and the outer membrane protein TolC constitute the bacteriocin colicin V secretion system in Escherichia coli. CvaB functions as an ATP-binding cassette transporter, and its C-terminal domain (CTD) contains typical motifs for the nucleotide-binding and Walker A and B sites and the ABC signature motif. To study the role of the CvaB CTD in the secretion of colicin V, a truncated construct of this domain was made and overexpressed. Different forms of the CvaB CTD were found during purification and identified as monomer, dimer, and oligomer forms by gel filtration and protein cross-linking. Nucleotide binding was shown to be critical for CvaB CTD dimerization. Oligomers could be converted to dimers by nucleotide triphosphate-Mg, and nucleotide release from dimers resulted in transient formation of monomers, followed by oligomerization and aggregation. Site-directed mutagenesis showed that the ABC signature motif was involved in the nucleotide-dependent dimerization. The spatial proximity of the Walker A site and the signature motif was shown by disulfide cross-linking a mixture of the A530C and L630C mutant proteins, while the A530C or L630C mutant protein did not dimerize on its own. Taken together, these results indicate that the CvaB CTD formed a nucleotide-dependent head-to-tail dimer.

Indexed as

ATP-Binding Cassette TransportersColicinsDimerizationEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialNucleotidesProtein Structure, TertiaryATP-Binding Cassette TransportersColicinsCvaB protein, E coliEscherichia coli ProteinsNucleotides

Identifiers

PMID16547024
PMCPMC1428426
OpenAlexW2094472023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.