Evidence map›Paper›PMID 16544270›Full record

ArticleYeast (Chichester, England)2006

Regulation of cardiolipin synthase levels in Saccharomyces cerevisiae.

Xuefeng Su, William Dowhan

Open access · greenAbstract read
In one paragraph

Article in Yeast (Chichester, England), 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Xuefeng SuDepartment of Biochemistry and Molecular Biology, University of Texas-Houston, Medical School, Houston, TX 77225, USA.
William Dowhan

Funding

PHOSPHOLIPIDS AND MITOCHONDRIAL FUNCTIONR01GM056389 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DOWHAN, WILLIAM · 1998 to 2011
$4.2M
NIGMS NIH HHS GM56389NIGMS NIH HHS R01 GM056389
6 · The paper itself

Abstract

The Saccharomyces cerevisiae cardiolipin (CL) synthase encoded by the CRD1 gene catalyses the synthesis of CL, which is localized to the inner mitochondrial membrane and plays an important role in mitochondrial function. To investigate how CRD1 expression is regulated, a lacZ reporter gene was placed under control of the CRD1 promoter and the 5'-untranslated region of its mRNA (P(CRD1)-lacZ). P(CRD1)-lacZ expression was 2.5 times higher in early stationary phase than in logarithmic phase for glucose grown cells. Non-fermentable growth resulted in a two-fold elevation in expression relative to glucose grown cells. A shift from glycerol to glucose rapidly repressed expression, whereas a shift from glucose to glycerol had the opposite effect. The derepression of P(CRD1)-lacZ expression by non-fermentable carbon sources was dependent on mitochondrial respiration. These results support a tight coordination between translation and transcription of the CRD1 gene, since similar effects by the above factors on CRD1 mRNA levels have been reported. In glucose-grown cells, P(CRD1)-lacZ expression was repressed 70% in a pgs1delta strain (lacks phosphatidylglycerol and CL) compared with wild-type and rho- cells and elevated 2.5-fold in crd1delta cells, which have increased phosphatidylglycerol levels, suggesting a role for phosphatidylglycerol in regulating CRD1 expression. Addition of inositol to the growth medium had no effect on expression. However, expression was elevated in an ino4delta mutant but not in ino2delta cells, suggesting multiple and separate functions for the inositol-responsive INO2/INO4 gene products, which normally function as a dimer in regulating gene function.

Indexed as

Base SequenceElectrophoretic Mobility Shift AssayGene Expression Regulation, EnzymologicGene Expression Regulation, FungalInositolMembrane ProteinsMitochondriaMolecular Sequence DataPhosphatidylglycerolsPhosphoric Monoester HydrolasesPromoter Regions, GeneticProtein BiosynthesisSaccharomyces cerevisiaeTranscription, GeneticTranscription Initiation SiteTransferases (Other Substituted Phosphate Groups)cardiolipin synthetaseInositolMembrane ProteinsPhosphatidylglycerolsphosphatidylglycerophosphatasePhosphoric Monoester HydrolasesTransferases (Other Substituted Phosphate Groups)

Identifiers

PMID16544270
PMCPMC4108995
OpenAlexW2049251829

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.